RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SHISA9B4DS77 424 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 GOSR1O95249 250 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 PLAUP00749 431 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 TACSTD2P09758 323 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 ANOS1P23352 680 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 LOXP28300 417 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-227ENST00000498056 MAP2K4P45985 399 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 WNT4P56705 351 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 RPS23P62266 143 aaKnown RBP11.71□□□□□ -0.53
CPNE1-227ENST00000498056 MED22Q15528 200 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 TBCEQ15813 527 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-227ENST00000498056 RSPO1Q2MKA7 263 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF684Q5T5D7 378 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 HIST2H2BCQ6DN03 193 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 ZNF773Q6PK81 442 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 UNQ6126/PRO20091Q6UXV3 157 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 NAA40Q86UY6 237 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 KLBQ86Z14 1044 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 SVOPQ8N4V2 548 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 OR2AE1Q8NHA4 323 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 NEUROG1Q92886 237 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 APOBEC3DQ96AK3 386 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-227ENST00000498056 PELI1Q96FA3 418 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 SIGLEC11Q96RL6 698 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 CDCA4Q9BXL8 241 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 TRIM36Q9NQ86 728 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 FAM206AQ9NX38 181 aa11.71□□□□□ -0.53
CPNE1-227ENST00000498056 PNMA8CA0A1B0GUJ8 204 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 PNPP00491 289 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 NGFP01138 241 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 NR4A1P22736 598 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 PCSK6P29122 969 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 GBX2P52951 348 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-227ENST00000498056 PRSS12P56730 875 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 PPP1CBP62140 327 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 DAZAP2Q15038 168 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-227ENST00000498056 TIGD6Q17RP2 521 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 ODF4Q2M2E3 257 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 WDR38Q5JTN6 314 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 RGS7BPQ6MZT1 257 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF544Q6NX49 715 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 NANOGP1Q8N7R0 232 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 NUP37Q8NFH4 326 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 OR8B12Q8NGG6 310 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 GATAD2BQ8WXI9 593 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 RORBQ92753 470 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 NR1H4Q96RI1 486 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-227ENST00000498056 TMEM204Q9BSN7 226 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 C1QTNF5Q9BXJ0 243 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 BCL2L14Q9BZR8 327 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 POFUT1Q9H488 388 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 UBTD1Q9HAC8 227 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 FZR1Q9UM11 496 aa11.7□□□□□ -0.54
CPNE1-227ENST00000498056 CHD3Q12873 2000 aaKnown RBP11.7□□□□□ -0.54
CPNE1-227ENST00000498056 ARFGEF3Q5TH69 2177 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 C5orf63A6NC05 138 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 J3QW42 95 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 ICMTO60725 284 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 SRSF10O75494 262 aaKnown RBP11.69□□□□□ -0.54
CPNE1-227ENST00000498056 DCTDP32321 178 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 RAD52P43351 418 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 UCP2P55851 309 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 NKX6-1P78426 367 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-227ENST00000498056 MALLQ13021 153 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 IRF3Q14653 427 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 GLYATL3Q5SZD4 288 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 XAF1Q6GPH4 301 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 MRPL21Q7Z2W9 205 aaKnown RBP11.69□□□□□ -0.54
CPNE1-227ENST00000498056 KCTD20Q7Z5Y7 419 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 ZFP41Q8N8Y5 198 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 OR52H1Q8NGJ2 320 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 SLC25A40Q8TBP6 338 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 AKAP1Q92667 903 aaKnown RBP eCLIP11.69□□□□□ -0.54
CPNE1-227ENST00000498056 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 OR5M11Q96RB7 305 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 OR2J1Q9GZK6 312 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 PBOV1Q9GZY1 135 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 OR10A2Q9H208 303 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 CLEC4MQ9H2X3 399 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-227ENST00000498056 ZNF696Q9H7X3 374 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 SP140LQ9H930 580 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 CA10Q9NS85 328 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 TBCCD1Q9NVR7 557 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 NUFIP1Q9UHK0 495 aaKnown RBP11.69□□□□□ -0.54
CPNE1-227ENST00000498056 OR52A1Q9UKL2 312 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 SLC22A13Q9Y226 551 aa11.69□□□□□ -0.54
CPNE1-227ENST00000498056 E9PI62 339 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 H3BSH0 61 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 XRCC2O43543 280 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 MRPS14O60783 128 aaKnown RBP11.68□□□□□ -0.54
CPNE1-227ENST00000498056 ATE1O95260 518 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 LALBAP00709 142 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 TTRP02766 147 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 HSMCR30P0CW71 290 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 ATP6V1B1P15313 513 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 GCH1P30793 250 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 THBS4P35443 961 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 KIR3DL2P43630 455 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 MMP16P51512 607 aa11.68□□□□□ -0.54
CPNE1-227ENST00000498056 GTF2A1P52655 376 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms