RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 C10orf53Q8N6V4 93 aa11.25□□□□□ -0.61
RNF220-218ENST00000497469 KLHL30-AS1Q8NEE0 82 aa11.25□□□□□ -0.61
RNF220-218ENST00000497469 LRRC8CQ8TDW0 803 aa11.25□□□□□ -0.61
RNF220-218ENST00000497469 H1FXQ92522 213 aaKnown RBP11.25□□□□□ -0.61
RNF220-218ENST00000497469 NABP1Q96AH0 204 aa11.25□□□□□ -0.61
RNF220-218ENST00000497469 ECSITQ9BQ95 431 aa11.25□□□□□ -0.61
RNF220-218ENST00000497469 PTTG3PQ9NZH4 202 aa11.25□□□□□ -0.61
RNF220-218ENST00000497469 ZIM2Q9NZV7 527 aa11.25□□□□□ -0.61
RNF220-218ENST00000497469 MRPL15Q9P015 296 aaKnown RBP11.25□□□□□ -0.61
RNF220-218ENST00000497469 RNF7Q9UBF6 113 aa11.25□□□□□ -0.61
RNF220-218ENST00000497469 SF3B6Q9Y3B4 125 aaKnown RBP11.25□□□□□ -0.61
RNF220-218ENST00000497469 TRIM64CA6NLI5 447 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 HMGB1P1B2RPK0 211 aaPredicted RBP11.24□□□□□ -0.61
RNF220-218ENST00000497469 RFXANKO14593 260 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 SLC2A10O95528 541 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 IL6P05231 212 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 ADORA3P0DMS8 318 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 PAICSP22234 425 aaKnown RBP11.24□□□□□ -0.61
RNF220-218ENST00000497469 PRKAR1BP31321 381 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 MVDP53602 400 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 CLRN1P58418 232 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 NET1Q7Z628 596 aaPredicted RBP11.24□□□□□ -0.61
RNF220-218ENST00000497469 LHFPL4Q7Z7J7 247 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 TRIML2Q8N7C3 387 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 FAM216BQ8N7L0 139 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 IL17DQ8TAD2 202 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 VPS33AQ96AX1 596 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 SLC25A44Q96H78 314 aaPredicted RBP11.24□□□□□ -0.61
RNF220-218ENST00000497469 RAX2Q96IS3 184 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 CCL13Q99616 98 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 SPATA9Q9BWV2 254 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 VIPAS39Q9H9C1 493 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 SIAEQ9HAT2 523 aa11.24□□□□□ -0.61
RNF220-218ENST00000497469 ARGLU1Q9NWB6 273 aaPredicted RBP11.24□□□□□ -0.61
RNF220-218ENST00000497469 TRAV38-1A0A0B4J264 116 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 LPLP06858 475 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 FPR3P25089 353 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 IDH3AP50213 366 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 POLR2JP52435 117 aaKnown RBP11.23□□□□□ -0.61
RNF220-218ENST00000497469 RAD23AP54725 363 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 LRRC74AQ0VAA2 488 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 IKZF1Q13422 519 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 SELPLGQ14242 412 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 MAPK11Q15759 364 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 ZNF260Q3ZCT1 412 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 CLDN22Q8N7P3 220 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 GOLGA6L1Q8N7Z2 621 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 OR52P1PQ8NH57 321 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 DYDC1Q8WWB3 177 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 ZNF582Q96NG8 517 aaPredicted RBP11.23□□□□□ -0.61
RNF220-218ENST00000497469 TRNT1Q96Q11 434 aaKnown RBP11.23□□□□□ -0.61
RNF220-218ENST00000497469 METTL8Q9H825 291 aaKnown RBP11.23□□□□□ -0.61
RNF220-218ENST00000497469 INTS9Q9NV88 658 aaKnown RBP11.23□□□□□ -0.61
RNF220-218ENST00000497469 MRPL39Q9NYK5 338 aaKnown RBP11.23□□□□□ -0.61
RNF220-218ENST00000497469 HSPG2P98160 4391 aa11.23□□□□□ -0.61
RNF220-218ENST00000497469 SH2D7A6NKC9 451 aaPredicted RBP11.22□□□□□ -0.61
RNF220-218ENST00000497469 POLR3GO15318 223 aaPredicted RBP11.22□□□□□ -0.61
RNF220-218ENST00000497469 NDUFA2O43678 99 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 SELLP14151 372 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 JUNBP17275 347 aaPredicted RBP11.22□□□□□ -0.61
RNF220-218ENST00000497469 FSTP19883 344 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 GP2P55259 537 aaKnown RBP11.22□□□□□ -0.61
RNF220-218ENST00000497469 LIN52Q52LA3 116 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 RABL3Q5HYI8 236 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 SLC2A7Q6PXP3 512 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 LRRC74BQ6ZQY2 392 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 RANBP3LQ86VV4 465 aaPredicted RBP11.22□□□□□ -0.61
RNF220-218ENST00000497469 PEX5LQ8IYB4 626 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 PTP4A1Q93096 173 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 DNAH11Q96DT5 4516 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 DMRTB1Q96MA1 342 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 MTHFD2LQ9H903 347 aaPredicted RBP11.22□□□□□ -0.61
RNF220-218ENST00000497469 ABCB10Q9NRK6 738 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 RPS6KB2Q9UBS0 482 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 ZNF443Q9Y2A4 671 aaPredicted RBP11.22□□□□□ -0.61
RNF220-218ENST00000497469 UGT2A1Q9Y4X1 527 aa11.22□□□□□ -0.61
RNF220-218ENST00000497469 VPS13DQ5THJ4 4388 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 IGKV1D-43A0A0B4J1Z2 117 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 ZCCHC18P0CG32 403 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 ETFAP13804 333 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 RAC2P15153 192 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 HOXB9P17482 250 aaPredicted RBP11.21□□□□□ -0.61
RNF220-218ENST00000497469 MRPL19P49406 292 aaKnown RBP11.21□□□□□ -0.61
RNF220-218ENST00000497469 ECH1Q13011 328 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 DEFB136Q30KP8 78 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 C11orf91Q3C1V1 193 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 C6orf10Q5SRN2 563 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 MSANTD1Q6ZTZ1 278 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 ZNF329Q86UD4 541 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 FUNDC1Q8IVP5 155 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 ALDH16A1Q8IZ83 802 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 OR5M8Q8NGP6 311 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 RPS4Y2Q8TD47 263 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 GTF2H4Q92759 462 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 ZNF583Q96ND8 569 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 SPATA25Q9BR10 227 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 PAIP1Q9H074 479 aaKnown RBP11.21□□□□□ -0.61
RNF220-218ENST00000497469 TPT1P8Q9HAU6 139 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 RETNQ9HD89 108 aa11.21□□□□□ -0.61
RNF220-218ENST00000497469 PRPF19Q9UMS4 504 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms