RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 LIMS4P0CW20 117 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 HIST1H1TP22492 207 aaPredicted RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 GDF1P27539 372 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 GALR1P47211 349 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 SLC6A11P48066 632 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 GUCA2BQ16661 112 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 PLEKHS1Q5SXH7 462 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 OR2G6Q5TZ20 316 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 CD276Q5ZPR3 534 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 GHSRQ92847 366 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 MARC2Q969Z3 335 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 YIPF6Q96EC8 236 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 FBXO8Q9NRD0 319 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ZDHHC7Q9NXF8 308 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 MOKQ9UQ07 419 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 LSM2Q9Y333 95 aaKnown RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 U3KQV3 271 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 EDC4Q6P2E9 1401 aaKnown RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 OVOS2A0A0G2JMS6 1433 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 OVOS2A0A0J9YW53 1432 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 INSIG1O15503 277 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 LEFTY1O75610 366 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 WASP42768 502 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 TPMTP51580 245 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 SLC5A12Q1EHB4 618 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 CLLU1Q5K131 121 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 OVOS2Q6IE36 1432 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ART4Q93070 314 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 LMF1Q96S06 567 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 CFAP74Q9C0B2 1584 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 PPIL3Q9H2H8 161 aaKnown RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 ADGRL3Q9HAR2 1447 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 TMEM59LQ9UK28 342 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ZDHHC8Q9ULC8 765 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 HEG1Q9ULI3 1381 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 DUS4LO95620 317 aaKnown RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 PMS2P2O95744 297 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ASAH2BP0C7U1 165 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 CR2P20023 1033 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 SLC5A2P31639 672 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 GPR4P46093 362 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 SRYQ05066 204 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 CTF1Q16619 201 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 EML3Q32P44 896 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 WIPI1Q5MNZ9 446 aaPredicted RBP5.36□□□□□ -1.55
USF3-204ENST00000496826 MARCH8Q5T0T0 291 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ASPHD2Q6ICH7 369 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 PIM3Q86V86 326 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ZBTB34Q8NCN2 500 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 OR8B3Q8NGG8 313 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 C14orf79Q96F83 325 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 SPATA25Q9BR10 227 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 NRN1Q9NPD7 142 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 CBLCQ9ULV8 474 aa5.36□□□□□ -1.55
USF3-204ENST00000496826 ESPL1Q14674 2120 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 GGTLC3B5MD39 225 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 HS3ST1O14792 307 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CEACAM5P06731 702 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 EFNA1P20827 205 aaPredicted RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 CCR5P51681 352 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CCL23P55773 120 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 DSC1Q08554 894 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 TMEM136Q6ZRR5 245 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 ZNF441Q8N8Z8 693 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 KHSRPQ92945 711 aaKnown RBP eCLIP5.35□□□□□ -1.55
USF3-204ENST00000496826 MS4A5Q9H3V2 200 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 OSER1Q9NX31 292 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 GALPQ9UBC7 116 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 LAMTOR3Q9UHA4 124 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 PRSS51A0A1B0GVH4 220 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 OR2A4O95047 310 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 NRASP01111 189 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 SPNP16150 400 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 SSBP1Q04837 148 aaKnown RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 ZNF818PQ6ZRF7 136 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 SLC25A43Q8WUT9 341 aaPredicted RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 CDS1Q92903 461 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 PIGTQ969N2 578 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 TOX2Q96NM4 488 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 OR2A7Q96R45 310 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 IFT22Q9H7X7 185 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CYSLTR2Q9NS75 346 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 TNFSF18Q9UNG2 199 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 NPTNQ9Y639 398 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 KLF3P57682 345 aaPredicted RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 SRSF4Q08170 494 aaKnown RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 PNRC1Q12796 327 aaPredicted RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 TMEM236Q5W0B7 351 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 FAHD2BQ6P2I3 314 aaPredicted RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 MORN3Q6PF18 240 aaPredicted RBP5.35□□□□□ -1.55
USF3-204ENST00000496826 CITED1Q99966 193 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CST9LQ9H4G1 147 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 ZNF337Q9Y3M9 751 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 OR2W1Q9Y3N9 320 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 TRAV18A0A075B6X5 111 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 TCRBV5S2A0A599 114 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 CD3DP04234 171 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 PSG2P11465 335 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 SMPD1P17405 629 aa5.35□□□□□ -1.55
USF3-204ENST00000496826 BAK1Q16611 211 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms