RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 CST1P01037 141 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 PPIAL4FP0DN26 164 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 MDH2P40926 338 aaKnown RBP13.26□□□□□ -0.29
HDAC4-213ENST00000496347 ENTPD1P49961 510 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 GK2Q14410 553 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-213ENST00000496347 ATG16L2Q8NAA4 619 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 BHLHE23Q8NDY6 225 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 OR9Q1Q8NGQ5 310 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 ST7LQ8TDW4 575 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 MEGF10Q96KG7 1140 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 THTPAQ9BU02 230 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 CHID1Q9BWS9 393 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 METTL17Q9H7H0 456 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-213ENST00000496347 GCM1Q9NP62 436 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 CMC2Q9NRP2 79 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 DCAF16Q9NXF7 216 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 UBAP1Q9NZ09 502 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
HDAC4-213ENST00000496347 NOP16Q9Y3C1 178 aaKnown RBP13.26□□□□□ -0.29
HDAC4-213ENST00000496347 FOXH1O75593 365 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 LCATP04180 440 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 SPARCP09486 303 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 SPI1P17947 270 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 CPT2P23786 658 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 FMO3P31513 532 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 GATA4P43694 442 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 SLC6A9P48067 706 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 PPP1R8Q12972 351 aaKnown RBP13.25□□□□□ -0.29
HDAC4-213ENST00000496347 ZMYND11Q15326 602 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 ZNF181Q2M3W8 571 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 TEX30Q5JUR7 227 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 DCAF12L2Q5VW00 463 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 FAHD2BQ6P2I3 314 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-213ENST00000496347 DRAM2Q6UX65 266 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 MRPL21Q7Z2W9 205 aaKnown RBP13.25□□□□□ -0.29
HDAC4-213ENST00000496347 CELF2-AS1Q8N7Q2 184 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 OR10S1Q8NGN2 331 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 OR6K6Q8NGW6 343 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 BCAS4Q8TDM0 211 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 GIPC3Q8TF64 312 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 FAHD2AQ96GK7 314 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 FEVQ99581 238 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 NIPSNAP1Q9BPW8 284 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 COPS4Q9BT78 406 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 C19orf24Q9BVV8 132 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 REPIN1Q9BWE0 567 aaKnown RBP13.25□□□□□ -0.29
HDAC4-213ENST00000496347 OPA3Q9H6K4 179 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 YY1AP1Q9H869 796 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 WDR76Q9H967 626 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 FAM53CQ9NYF3 392 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 PCDHB10Q9UN67 800 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 ARHGAP32A7KAX9 2087 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 DOCK11Q5JSL3 2073 aa13.25□□□□□ -0.29
HDAC4-213ENST00000496347 A0A0A6YYJ9 748 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 TVP23AA6NH52 213 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 LRRC30A6NM36 301 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 A8MXK9 166 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 ZNF878C9JN71 531 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 TMEM178BH3BS89 294 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 GYG2O15488 501 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 MLNRO43193 412 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 FSTL3O95633 263 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 GRK5P34947 590 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 RPS27P42677 84 aaKnown RBP13.24□□□□□ -0.29
HDAC4-213ENST00000496347 FLOT2Q14254 428 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 LYPD4Q6UWN0 246 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 PGAP1Q75T13 922 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 DCXRQ7Z4W1 244 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 C1QL2Q7Z5L3 287 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 LRRC28Q86X40 367 aaPredicted RBP13.24□□□□□ -0.29
HDAC4-213ENST00000496347 OR51L1Q8NGJ5 315 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 TMPRSS13Q9BYE2 586 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 SLC22A4Q9H015 551 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 TMEM100Q9NV29 134 aa13.24□□□□□ -0.29
HDAC4-213ENST00000496347 F5H0A9 414 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-213ENST00000496347 H3BN98 237 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 E2F6O75461 281 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 GYPBP06028 91 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 SBK2P0C263 348 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 PSKH1P11801 424 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 PAICSP22234 425 aaKnown RBP13.23□□□□□ -0.29
HDAC4-213ENST00000496347 GRB2P62993 217 aaKnown RBP13.23□□□□□ -0.29
HDAC4-213ENST00000496347 LCN2P80188 198 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 ZNF771Q7L3S4 317 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-213ENST00000496347 C1orf87Q8N0U7 546 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 CANT1Q8WVQ1 401 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 SPRYD4Q8WW59 207 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-213ENST00000496347 ZNRF4Q8WWF5 429 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 ERGIC1Q969X5 290 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 SLAMF6Q96DU3 332 aa13.23□□□□□ -0.29
HDAC4-213ENST00000496347 PATZ1Q9HBE1 687 aaKnown RBP13.23□□□□□ -0.29
HDAC4-213ENST00000496347 POLR3KQ9Y2Y1 108 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-213ENST00000496347 LOC105371242A0A075B767 164 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 F5H5P2 479 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 GNGT2O14610 69 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 EPHA1P21709 976 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 CD200P41217 278 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 SLC15A1P46059 708 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 SNAI3Q3KNW1 292 aa13.22□□□□□ -0.29
HDAC4-213ENST00000496347 LINC01590Q5TEZ4 76 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms