RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 ARRDC5A6NEK1 342 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 RIIAD1A6NNX1 92 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 H3BN98 237 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 M0R135 149 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 ZNF593O00488 134 aaPredicted RBP9.98□□□□□ -0.81
THBS3-208ENST00000496332 MLNRO43193 412 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 PNPP00491 289 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 CLUP10909 449 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 ENTPD1P49961 510 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 FLOT2Q14254 428 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 KRTAP24-1Q3LI83 254 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 SHQ1Q6PI26 577 aaKnown RBP9.98□□□□□ -0.81
THBS3-208ENST00000496332 DCXRQ7Z4W1 244 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 SPATA24Q86W54 205 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 IQCF1Q8N6M8 205 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 OR6K6Q8NGW6 343 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 TEX47Q8TBZ9 253 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 SLCO4A1Q96BD0 722 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 SLC7A6OSQ96CW6 309 aaPredicted RBP9.98□□□□□ -0.81
THBS3-208ENST00000496332 ZNF799Q96GE5 643 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 MEGF10Q96KG7 1140 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 METTL17Q9H7H0 456 aaPredicted RBP9.98□□□□□ -0.81
THBS3-208ENST00000496332 GCM1Q9NP62 436 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 CMC2Q9NRP2 79 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 DDX28Q9NUL7 540 aaKnown RBP9.98□□□□□ -0.81
THBS3-208ENST00000496332 TMEM100Q9NV29 134 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 PDP1Q9P0J1 537 aaPredicted RBP9.98□□□□□ -0.81
THBS3-208ENST00000496332 METRNQ9UJH8 293 aa9.98□□□□□ -0.81
THBS3-208ENST00000496332 A0A0G2JMP0 313 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 IGHV3-64DA0A0J9YX35 117 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 A0A0X1KG70 313 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 FAM183AA6NL82 134 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 F5H5P2 479 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 TMEM178BH3BS89 294 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 E2F6O75461 281 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 DNAJC8O75937 253 aaPredicted RBP9.97□□□□□ -0.81
THBS3-208ENST00000496332 HLA-DPB1P04440 258 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 ZNF3P17036 446 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 HOXB6P17509 224 aaKnown RBP9.97□□□□□ -0.81
THBS3-208ENST00000496332 POU1F1P28069 291 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 GRK5P34947 590 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 SLC6A9P48067 706 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 SRP9P49458 86 aaKnown RBP9.97□□□□□ -0.81
THBS3-208ENST00000496332 MMP16P51512 607 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 BLVRAP53004 296 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 BTG1P62324 171 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 LCN2P80188 198 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 ZMYND11Q15326 602 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 TAF13Q15543 124 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 PCK2Q16822 640 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 TEX30Q5JUR7 227 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 PGAP1Q75T13 922 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 LRRC28Q86X40 367 aaPredicted RBP9.97□□□□□ -0.81
THBS3-208ENST00000496332 SPICQ8N5J4 248 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 RFLNBQ8N5W9 214 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 OR4M2Q8NGB6 313 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 ZNF420Q8TAQ5 688 aaPredicted RBP9.97□□□□□ -0.81
THBS3-208ENST00000496332 ST7LQ8TDW4 575 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 OTULINQ96BN8 352 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 SLAMF6Q96DU3 332 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 SIGLEC11Q96RL6 698 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 COPS4Q9BT78 406 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 MED20Q9H944 212 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 CENPMQ9NSP4 180 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 PCDHB10Q9UN67 800 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 POMPQ9Y244 141 aa9.97□□□□□ -0.81
THBS3-208ENST00000496332 STAB1Q9NY15 2570 aa9.96□□□□□ -0.81
THBS3-208ENST00000496332 LOC105371242A0A075B767 164 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 A0A1B0GWJ7 208 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 IFNL4K9M1U5 179 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 TCF21O43680 179 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 FKBP6O75344 327 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 AVPP01185 164 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 PRKACGP22612 351 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 ANOS1P23352 680 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 ZFP36P26651 326 aaKnown RBP9.96□□□□□ -0.82
THBS3-208ENST00000496332 OTX1P32242 354 aaPredicted RBP9.96□□□□□ -0.82
THBS3-208ENST00000496332 PRKXP51817 358 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 CBX1P83916 185 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 GINS1Q14691 196 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 SNAI3Q3KNW1 292 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 TMEM155Q4W5P6 130 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 LINC01590Q5TEZ4 76 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 DCAF12L2Q5VW00 463 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 LIPNQ5VXI9 398 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 DRAM2Q6UX65 266 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 C1orf229Q6ZS94 237 aaPredicted RBP9.96□□□□□ -0.82
THBS3-208ENST00000496332 SPATC1Q76KD6 591 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 MRPL21Q7Z2W9 205 aaKnown RBP9.96□□□□□ -0.82
THBS3-208ENST00000496332 MOGAT3Q86VF5 341 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 HS3ST5Q8IZT8 346 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 KLHL36Q8N4N3 616 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 SPRYD4Q8WW59 207 aaPredicted RBP9.96□□□□□ -0.82
THBS3-208ENST00000496332 KCNJ15Q99712 375 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 TMPRSS13Q9BYE2 586 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 OCEL1Q9H607 264 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 YY1AP1Q9H869 796 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 ZNF556Q9HAH1 456 aa9.96□□□□□ -0.82
THBS3-208ENST00000496332 PATZ1Q9HBE1 687 aaKnown RBP9.96□□□□□ -0.82
THBS3-208ENST00000496332 DNAJB9Q9UBS3 223 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms