RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 PEX19P40855 299 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 MMP16P51512 607 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 IDH3GP51553 393 aaPredicted RBP13.03□□□□□ -0.32
GAPDH-210ENST00000496049 BLMHQ13867 455 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 RAB39AQ14964 217 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 CDK5R1Q15078 307 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 C3orf36Q3SXR2 165 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 ZNF485Q8NCK3 441 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 ITLN2Q8WWU7 325 aaPredicted RBP13.03□□□□□ -0.32
GAPDH-210ENST00000496049 OPALINQ96PE5 141 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 KCNS3Q9BQ31 491 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 MED18Q9BUE0 208 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 CDH20Q9HBT6 801 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 NOX3Q9HBY0 568 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 NGBQ9NPG2 151 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 NDRG3Q9UGV2 375 aa13.03□□□□□ -0.32
GAPDH-210ENST00000496049 TRBV2A0A0J9YWF9 115 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 C5orf49A4QMS7 147 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 ACOD1A6NK06 481 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 TMEM212A6NML5 194 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 CCRL2O00421 344 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 IGKV3-15P01624 115 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 TFAP2AP05549 437 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 CPEP16870 476 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 CCNOP22674 350 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 CRYGSP22914 178 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 APEX1P27695 318 aaKnown RBP13.02□□□□□ -0.33
GAPDH-210ENST00000496049 PSMB10P40306 273 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 RGS6P49758 472 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 PRKXP51817 358 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 GPR50Q13585 617 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 TAB1Q15750 504 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 TSTQ16762 297 aaKnown RBP13.02□□□□□ -0.33
GAPDH-210ENST00000496049 FDX2Q6P4F2 183 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 UNQ6126/PRO20091Q6UXV3 157 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 CPEB3Q8NE35 698 aaKnown RBP13.02□□□□□ -0.33
GAPDH-210ENST00000496049 IL17RDQ8NFM7 739 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 OR52H1Q8NGJ2 320 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 SMIM19Q96E16 107 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 CRNNQ9UBG3 495 aaPredicted RBP13.02□□□□□ -0.33
GAPDH-210ENST00000496049 EIF3KQ9UBQ5 218 aaKnown RBP13.02□□□□□ -0.33
GAPDH-210ENST00000496049 GRIP1Q9Y3R0 1128 aa13.02□□□□□ -0.33
GAPDH-210ENST00000496049 PNMA8CA0A1B0GUJ8 204 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 GPRIN2O60269 458 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 NOL3O60936 208 aaKnown RBP13.01□□□□□ -0.33
GAPDH-210ENST00000496049 ACSM4P0C7M7 580 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 UBCP0CG48 685 aaKnown RBP13.01□□□□□ -0.33
GAPDH-210ENST00000496049 CD99P14209 185 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 ZNF14P17017 642 aaPredicted RBP13.01□□□□□ -0.33
GAPDH-210ENST00000496049 CD53P19397 219 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 CELP19835 753 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 PSMA1P25786 263 aaKnown RBP13.01□□□□□ -0.33
GAPDH-210ENST00000496049 OTX1P32242 354 aaPredicted RBP13.01□□□□□ -0.33
GAPDH-210ENST00000496049 ALDH3B2P48448 385 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 CCR9P51686 369 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 GP2P55259 537 aaKnown RBP13.01□□□□□ -0.33
GAPDH-210ENST00000496049 ZNF121P58317 390 aaPredicted RBP13.01□□□□□ -0.33
GAPDH-210ENST00000496049 MFGE8Q08431 387 aaPredicted RBP13.01□□□□□ -0.33
GAPDH-210ENST00000496049 ALKBH1Q13686 389 aaKnown RBP13.01□□□□□ -0.33
GAPDH-210ENST00000496049 TRAM1Q15629 374 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 TIMM50Q3ZCQ8 353 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 LIPKQ5VXJ0 399 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 ALKBH2Q6NS38 261 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 COMMD2Q86X83 199 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 ZNF676Q8N7Q3 588 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 ZFP41Q8N8Y5 198 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 OR2G2Q8NGZ5 317 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 PGAM5Q96HS1 289 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 C4orf45Q96LM5 186 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 OR10A2Q9H208 303 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 BRD7Q9NPI1 651 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 NDUFB11Q9NX14 153 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 FAM206AQ9NX38 181 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 NUFIP1Q9UHK0 495 aaKnown RBP13.01□□□□□ -0.33
GAPDH-210ENST00000496049 OR52A1Q9UKL2 312 aa13.01□□□□□ -0.33
GAPDH-210ENST00000496049 COL6A5A8TX70 2615 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 E9PI62 339 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 J3QW42 95 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 M0R1B8 84 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 OGG1O15527 345 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 IGLV1-44P01699 117 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 LCATP04180 440 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 DBHP09172 617 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 GABRA5P31644 462 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 ZNF83P51522 516 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 GTF2A1P52655 376 aaPredicted RBP13□□□□□ -0.33
GAPDH-210ENST00000496049 SLC3A1Q07837 685 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 TPBGQ13641 420 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 KRTAP27-1Q3LI81 207 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 WDR38Q5JTN6 314 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 DMKNQ6E0U4 476 aaPredicted RBP13□□□□□ -0.33
GAPDH-210ENST00000496049 ZNF704Q6ZNC4 412 aaPredicted RBP13□□□□□ -0.33
GAPDH-210ENST00000496049 CATSPERDQ86XM0 798 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 WFDC8Q8IUA0 241 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 ZNF584Q8IVC4 421 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 OR13F1Q8NGS4 319 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 OR5AK2Q8NH90 309 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 SLC7A6Q92536 515 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 THRSPQ92748 146 aa13□□□□□ -0.33
GAPDH-210ENST00000496049 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms