RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 GPR176Q14439 515 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 OR1C1Q15619 314 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 HIST3H3Q16695 136 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 TATDN3Q17R31 274 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 RSPO4Q2I0M5 234 aaPredicted RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 TBRG1Q3YBR2 411 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 RNASE12Q5GAN4 147 aaKnown RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 B3GNTL1Q67FW5 361 aaPredicted RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 ABLIM2Q6H8Q1 611 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 SLC25A25Q6KCM7 469 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 CORO6Q6QEF8 472 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 AAED1Q7RTV5 226 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 ABHD12BQ7Z5M8 362 aaPredicted RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 YRDCQ86U90 279 aaKnown RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 LSRQ86X29 649 aaPredicted RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 MCEMP1Q8IX19 187 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 CDH26Q8IXH8 852 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 SLC22A24Q8N4F4 322 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 ZBTB8BQ8NAP8 495 aaPredicted RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 OR2M7Q8NG81 312 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 EDARADDQ8WWZ3 215 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 YIPF5Q969M3 257 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 FAM46BQ96A09 425 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 PTX4Q96A99 478 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 FAM3DQ96BQ1 224 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 C10orf35Q96D05 121 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 NEDD4LQ96PU5 975 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 OR2M2Q96R28 347 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 S100A13Q99584 98 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 UQCC2Q9BRT2 126 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 MARVELD1Q9BSK0 173 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 RBM24Q9BX46 236 aaKnown RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 SPRY4Q9C004 299 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 ATG5Q9H1Y0 275 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 SLCO5A1Q9H2Y9 848 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 CCDC86Q9H6F5 360 aaKnown RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 GPN1Q9HCN4 374 aaPredicted RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 TMEM138Q9NPI0 162 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 ZNF275Q9NSD4 429 aaPredicted RBP6.13□□□□□ -1.43
USP39-219ENST00000496047 PARPBPQ9NWS1 579 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 FAM206AQ9NX38 181 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 ANKRD10Q9NXR5 420 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 ASH2LQ9UBL3 628 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 UPB1Q9UBR1 384 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 OR5V1Q9UGF6 321 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 ZNF391Q9UJN7 358 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 FBXL3Q9UKT7 428 aa6.13□□□□□ -1.43
USP39-219ENST00000496047 TRIOO75962 3097 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 TRAV8-7A0A075B6U6 113 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 IGHV3-15A0A0B4J1V0 119 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 IGKV1D-43A0A0B4J1Z2 117 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 A0A0B4J203 849 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 A0A1B0GTH9 108 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 LOC101059948A0A1B0GTJ6 334 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 OR5H15A6NDH6 313 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 CYSRT1A8MQ03 144 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.12□□□□□ -1.43
USP39-219ENST00000496047 H3BSH0 61 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 CXCL13O43927 109 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 SSX4O60224 188 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 SRSF10O75494 262 aaKnown RBP6.12□□□□□ -1.43
USP39-219ENST00000496047 GLSO94925 669 aaPredicted RBP6.12□□□□□ -1.43
USP39-219ENST00000496047 WISP1O95388 367 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 BPNT1O95861 308 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 PNPP00491 289 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 TTRP02766 147 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 YES1P07947 543 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 HCKP08631 526 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 CST2P09228 141 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 CD3GP09693 182 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 H2AFB2P0C5Z0 115 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 ACSM4P0C7M7 580 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 UBBP0CG47 229 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 IGFBP3P17936 291 aaPredicted RBP6.12□□□□□ -1.43
USP39-219ENST00000496047 CDK2P24941 298 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 SLC6A1P30531 599 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 PRSS3P35030 304 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 THBS4P35443 961 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 PRKXP51817 358 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 SUCLG1P53597 346 aaKnown RBP6.12□□□□□ -1.43
USP39-219ENST00000496047 CLDN12P56749 244 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 RRAS2P62070 204 aaPredicted RBP6.12□□□□□ -1.43
USP39-219ENST00000496047 MRPS34P82930 218 aaKnown RBP6.12□□□□□ -1.43
USP39-219ENST00000496047 DGCR2P98153 550 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 C19orf57Q0VDD7 668 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 Q0VFX4 171 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 CBX3Q13185 183 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 MAB21L1Q13394 359 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 ARL6IP1Q15041 203 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 RAB35Q15286 201 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 STK11Q15831 433 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 CCDC92Q53HC0 331 aaPredicted RBP6.12□□□□□ -1.43
USP39-219ENST00000496047 WIPI1Q5MNZ9 446 aaPredicted RBP6.12□□□□□ -1.43
USP39-219ENST00000496047 ELFN2Q5R3F8 820 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 RIPPLY2Q5TAB7 128 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 ANKRD16Q6P6B7 361 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 FOXL2NBQ6ZUU3 175 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 BTN2A1Q7KYR7 527 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 FGD2Q7Z6J4 655 aa6.12□□□□□ -1.43
USP39-219ENST00000496047 CNTRLQ7Z7A1 2325 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms