RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 TCRBV5S2A0A599 114 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 TMEM89A2RUT3 159 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 TVP23AA6NH52 213 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 F5H5K5 113 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 RENP00797 406 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 WNT2P09544 360 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 CD80P33681 288 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 TSPAN31Q12999 210 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 SCGB2A2Q13296 93 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 SAMD4BQ5PRF9 694 aaKnown RBP9.74□□□□□ -0.85
VTI1A-208ENST00000494728 PRAMEF6Q5VXH4 476 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 PGM2L1Q6PCE3 622 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 LYPD2Q6UXB3 125 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 OR4C15Q8NGM1 316 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 OR9Q1Q8NGQ5 310 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 OR2AE1Q8NHA4 323 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 PITX2Q99697 317 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 TMEM246Q9BRR3 403 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 SUCNR1Q9BXA5 334 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 NSRP1Q9H0G5 558 aaKnown RBP9.74□□□□□ -0.85
VTI1A-208ENST00000494728 TMEM165Q9HC07 324 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 TAGLN3Q9UI15 199 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 CDH10Q9Y6N8 788 aa9.74□□□□□ -0.85
VTI1A-208ENST00000494728 WNK1Q9H4A3 2382 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 DNAJC9-AS1A6NH13 148 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 TRIM77I1YAP6 450 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 SURF4O15260 269 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 GMNNO75496 209 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 GYPBP06028 91 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 CLUP10909 449 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 RPS2P15880 293 aaKnown RBP9.73□□□□□ -0.85
VTI1A-208ENST00000494728 NOS3P29474 1203 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 MAGEA2P43356 314 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 RAD23AP54725 363 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 SMIM11AP58511 58 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 GNGT1P63211 74 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 MPPED2Q15777 294 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF404Q494X3 552 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 ESCO2Q56NI9 601 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 AWAT1Q58HT5 328 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 ARMCX4Q5H9R4 360 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 PIGWQ7Z7B1 504 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 CPLX4Q7Z7G2 160 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 KLBQ86Z14 1044 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 TEX29Q8N6K0 151 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 OR13G1Q8NGZ3 307 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 OR4Q3Q8NH05 313 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 POP5Q969H6 163 aaKnown RBP9.73□□□□□ -0.85
VTI1A-208ENST00000494728 MCUR1Q96AQ8 359 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 SLCO4A1Q96BD0 722 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF582Q96NG8 517 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-208ENST00000494728 SSBP3Q9BWW4 388 aaPredicted RBP9.73□□□□□ -0.85
VTI1A-208ENST00000494728 DDX28Q9NUL7 540 aaKnown RBP9.73□□□□□ -0.85
VTI1A-208ENST00000494728 LRCH1Q9Y2L9 728 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 AUP1Q9Y679 476 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 COMMD3-BMI1R4GMX3 469 aa9.73□□□□□ -0.85
VTI1A-208ENST00000494728 MDFIC2A0A1B0GVS7 189 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 M0R135 149 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 FAM20BO75063 409 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 FCN3O75636 299 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 SOX14O95416 240 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 GASTP01350 101 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 HLA-DQA2P01906 255 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 LCATP04180 440 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 SLC2A1P11166 492 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 OTX1P32242 354 aaPredicted RBP9.72□□□□□ -0.85
VTI1A-208ENST00000494728 GATA4P43694 442 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 SRP9P49458 86 aaKnown RBP9.72□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF92Q03936 586 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 PAX8Q06710 450 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF181Q2M3W8 571 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 GLYATL3Q5SZD4 288 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 DOK3Q7L591 496 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 MUC20Q8N307 709 aaPredicted RBP9.72□□□□□ -0.85
VTI1A-208ENST00000494728 SLC37A3Q8NCC5 494 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 PROKR2Q8NFJ6 384 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 OR5L1Q8NGL2 311 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 GNPDA2Q8TDQ7 276 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 GCDHQ92947 438 aaPredicted RBP9.72□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF799Q96GE5 643 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 RBM4Q9BWF3 364 aaKnown RBP9.72□□□□□ -0.85
VTI1A-208ENST00000494728 CDADC1Q9BWV3 514 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 UFSP2Q9NUQ7 469 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 IL20Q9NYY1 176 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 CTSZQ9UBR2 303 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 NUP50Q9UKX7 468 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 TMCC3Q9ULS5 477 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 ARL2BPQ9Y2Y0 163 aa9.72□□□□□ -0.85
VTI1A-208ENST00000494728 TRAV40A0A0B4J280 105 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 IGHV2-70DA0A0C4DH43 119 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 C22orf46C9J442 243 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 TNFRSF11BO00300 401 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 ATP8B1O43520 1251 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 IDH3BO43837 385 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 EGR1P18146 543 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 CA6P23280 308 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 CD200P41217 278 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 HMGA2P52926 109 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 MS4A2Q01362 244 aa9.71□□□□□ -0.86
VTI1A-208ENST00000494728 CRMP1Q14194 572 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms