RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SF3B4Q15427 424 aaKnown RBP eCLIP5.93□□□□□ -1.461e-52■■□□□ 14.1
MSH5-217ENST00000494458 C3AR1Q16581 482 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 ACSF3Q4G176 576 aaPredicted RBP5.93□□□□□ -1.46
MSH5-217ENST00000494458 C1QTNF12Q5T7M4 302 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 BCL2L15Q5TBC7 163 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 FBXW9Q5XUX1 488 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 STEAP3Q658P3 488 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 RTL6Q6ICC9 239 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 CNIH2Q6PI25 160 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 CRIP3Q6Q6R5 217 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 KLHL24Q6TFL4 600 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 TFAP2EQ6VUC0 442 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 DCDC5Q6ZRR9 648 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 SEM1Q6ZVN7 128 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 DOK3Q7L591 496 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 SERPINA12Q8IW75 414 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 CCDC36Q8IYA8 594 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 ZNF100Q8IYN0 542 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 Q8NA96 180 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 MINDY2Q8NBR6 621 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 OR52H1Q8NGJ2 320 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 OR5H6Q8NGV6 325 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 OR1F12Q8NHA8 337 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 SETD6Q8TBK2 473 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 HTRA1Q92743 480 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 BCL2L2Q92843 193 aaPredicted RBP5.93□□□□□ -1.46
MSH5-217ENST00000494458 PTX4Q96A99 478 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 APH1AQ96BI3 265 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 FOXRED1Q96CU9 486 aaPredicted RBP5.93□□□□□ -1.46
MSH5-217ENST00000494458 ORAI1Q96D31 301 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 ABHD17AQ96GS6 310 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 LYZL4Q96KX0 146 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 ALKBH3Q96Q83 286 aaPredicted RBP5.93□□□□□ -1.46
MSH5-217ENST00000494458 SH3GL3Q99963 347 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 C1QTNF5Q9BXJ0 243 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 TCF7L1Q9HCS4 588 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 ZNF391Q9UJN7 358 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 DHDHQ9UQ10 334 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 SLC5A6Q9Y289 635 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 AK6Q9Y3D8 172 aaKnown RBP5.93□□□□□ -1.46
MSH5-217ENST00000494458 ETV7Q9Y603 341 aa5.93□□□□□ -1.46
MSH5-217ENST00000494458 DMXL2Q8TDJ6 3036 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 BSNQ9UPA5 3926 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 C5orf63A6NC05 138 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 FABP12A6NFH5 140 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 ZNF587BE7ETH6 402 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 M0R135 149 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 P2RY10O00398 339 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 RRP8O43159 456 aaKnown RBP5.92□□□□□ -1.46
MSH5-217ENST00000494458 SYT7O43581 403 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 SULT1B1O43704 296 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 GSTZ1O43708 216 aaPredicted RBP5.92□□□□□ -1.46
MSH5-217ENST00000494458 HPGDSO60760 199 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 PAHP00439 452 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 CD2P06729 351 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 EIF4EP06730 217 aaKnown RBP5.92□□□□□ -1.46
MSH5-217ENST00000494458 CSF3P09919 207 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 PRF1P14222 555 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 GABRA1P14867 456 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 B4GALT1P15291 398 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 COX5AP20674 150 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 CEACAM8P31997 349 aaPredicted RBP5.92□□□□□ -1.46
MSH5-217ENST00000494458 TIMP3P35625 211 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 SOX2P48431 317 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 CX3CR1P49238 355 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 TDGF1P3P51864 188 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 FOXG1P55316 489 aaPredicted RBP5.92□□□□□ -1.46
MSH5-217ENST00000494458 TPTEP56180 551 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 QRFPP83859 136 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 HGFACQ04756 655 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 TNK1Q13470 666 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 BAK1Q16611 211 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 LINC00303Q3SY05 128 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 IDNKQ5T6J7 187 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 TMEM42Q69YG0 159 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 OR2A2Q6IF42 318 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 ANKRD16Q6P6B7 361 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 C16orf87Q6PH81 154 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 PLXDC2Q6UX71 529 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 Q6ZT83 130 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 UTS2BQ765I0 119 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 SPATC1Q76KD6 591 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 CHMP1BQ7LBR1 199 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 SLC16A14Q7RTX9 510 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 ABHD12BQ7Z5M8 362 aaPredicted RBP5.92□□□□□ -1.46
MSH5-217ENST00000494458 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.92□□□□□ -1.46
MSH5-217ENST00000494458 NAA40Q86UY6 237 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 OR5AS1Q8N127 324 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 LRRC18Q8N456 261 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 CPEB3Q8NE35 698 aaKnown RBP5.92□□□□□ -1.46
MSH5-217ENST00000494458 OR1J2Q8NGS2 313 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 OR6K3Q8NGY3 331 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 TRMT10AQ8TBZ6 339 aaKnown RBP5.92□□□□□ -1.46
MSH5-217ENST00000494458 OR51E1Q8TCB6 317 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 RAB40AQ8WXH6 277 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 SPTSSAQ969W0 71 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 SGK3Q96BR1 496 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 SLC25A38Q96DW6 304 aa5.92□□□□□ -1.46
MSH5-217ENST00000494458 ADAT3Q96EY9 351 aaPredicted RBP5.92□□□□□ -1.46
MSH5-217ENST00000494458 ZNF799Q96GE5 643 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms