RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 CDONQ4KMG0 1287 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 FAM57BQ71RH2 274 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 KCTD20Q7Z5Y7 419 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 FBXL14Q8N1E6 418 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 SLC25A40Q8TBP6 338 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 TMEM171Q8WVE6 324 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 PGAM5Q96HS1 289 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 PLEKHF2Q9H8W4 249 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 PLCE1Q9P212 2302 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 GTF2A1LQ9UNN4 478 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 STARD10Q9Y365 291 aa12.54□□□□□ -0.4
BRCA1-223ENST00000494123 DCHS2Q6V1P9 2916 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 TMEM269A0A1B0GVZ9 245 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 J3QLW9 94 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 OR4A8P0C604 315 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 ZNF19P17023 458 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 TUBG1P23258 451 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 TTKP33981 857 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 SELENOVP59797 346 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 ZNF718Q3SXZ3 478 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 C20orf204Q6ZNR8 217 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 COLCA1Q6ZS62 124 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 MUC15Q8N387 334 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 KLHL36Q8N4N3 616 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 ZNF611Q8N823 705 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 OR52H1Q8NGJ2 320 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 C4orf36Q96KX1 117 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 OR2J1Q9GZK6 312 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 TUBG2Q9NRH3 451 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 ACOXLQ9NUZ1 547 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 FKBP14Q9NWM8 211 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 PTTG3PQ9NZH4 202 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 FZR1Q9UM11 496 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 LRRC42Q9Y546 428 aa12.53□□□□□ -0.4
BRCA1-223ENST00000494123 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 ATE1O95260 518 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 CDK1P06493 297 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 LIMS3P0CW19 117 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 LIMS4P0CW20 117 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 CRHBPP24387 322 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 EEF1B2P24534 225 aaKnown RBP12.52□□□□□ -0.4
BRCA1-223ENST00000494123 SERPINF1P36955 418 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 ETV1P50549 477 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 OR12D2P58182 307 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 MVKQ03426 396 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 ADIPOQQ15848 244 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 TIGD6Q17RP2 521 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 SNAI3Q3KNW1 292 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 ZNF684Q5T5D7 378 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 AGAP6Q5VW22 663 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 LIPNQ5VXI9 398 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 TMPRSS11AQ6ZMR5 421 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 SYS1Q8N2H4 156 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 SYNPRQ8TBG9 265 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 MRPL24Q96A35 216 aaKnown RBP12.52□□□□□ -0.4
BRCA1-223ENST00000494123 OR10A2Q9H208 303 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 PLK3Q9H4B4 646 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 DUSP13Q9UII6 198 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 R4GMQ9 66 aa12.52□□□□□ -0.4
BRCA1-223ENST00000494123 CELSR2Q9HCU4 2923 aa12.52□□□□□ -0.41
BRCA1-223ENST00000494123 ACOD1A6NK06 481 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 MYL12BO14950 172 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 XRCC2O43543 280 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 C21orf33P30042 268 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-223ENST00000494123 MMP16P51512 607 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 KLF3P57682 345 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-223ENST00000494123 SLC35A2P78381 396 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 GFOD2Q3B7J2 385 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 KLF14Q8TD94 323 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-223ENST00000494123 MARS2Q96GW9 593 aaKnown RBP12.51□□□□□ -0.41
BRCA1-223ENST00000494123 SYT3Q9BQG1 590 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 CCDC90BQ9GZT6 254 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 POFUT1Q9H488 388 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 MOB1AQ9H8S9 216 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 FAM206AQ9NX38 181 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 CAB39Q9Y376 341 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-223ENST00000494123 SNX5Q9Y5X3 404 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 RAI1Q7Z5J4 1906 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-223ENST00000494123 UNC79Q9P2D8 2635 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 A0A1W2PPW3 197 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 B9A039 149 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 H3BSA7 217 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 RGS10O43665 173 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 MT-ND5P03915 603 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 ADRA2AP08913 450 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 PSMB10P40306 273 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 KRTAP10-9P60411 292 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 MFGE8Q08431 387 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-223ENST00000494123 GLYATL3Q5SZD4 288 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 BCL2L15Q5TBC7 163 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 PRSS45Q7RTY3 260 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 MRPL21Q7Z2W9 205 aaKnown RBP12.51□□□□□ -0.41
BRCA1-223ENST00000494123 EGFL6Q8IUX8 553 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 OR2AE1Q8NHA4 323 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 SIGLEC11Q96RL6 698 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 ZNF649Q9BS31 505 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 MRPL37Q9BZE1 423 aaKnown RBP12.51□□□□□ -0.41
BRCA1-223ENST00000494123 PBOV1Q9GZY1 135 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 DUSP21Q9H596 190 aa12.51□□□□□ -0.41
BRCA1-223ENST00000494123 ISG20L2Q9H9L3 353 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms