RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 CDH24Q86UP0 819 aa15.34■□□□□ 0.05
PDLIM7-208ENST00000493815 DTX2Q86UW9 622 aa15.34■□□□□ 0.05
PDLIM7-208ENST00000493815 OR2AE1Q8NHA4 323 aa15.34■□□□□ 0.05
PDLIM7-208ENST00000493815 SYNPRQ8TBG9 265 aa15.34■□□□□ 0.05
PDLIM7-208ENST00000493815 IPCEF1Q8WWN9 437 aaPredicted RBP15.34■□□□□ 0.05
PDLIM7-208ENST00000493815 CBLN4Q9NTU7 201 aa15.34■□□□□ 0.05
PDLIM7-208ENST00000493815 ZNF319Q9P2F9 582 aa15.34■□□□□ 0.05
PDLIM7-208ENST00000493815 NAV2Q8IVL1 2488 aa15.33■□□□□ 0.05
PDLIM7-208ENST00000493815 VSTM5A8MXK1 200 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 PHYHO14832 338 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 FADS2O95864 444 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 ZNF250P15622 560 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 MVKQ03426 396 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 SWI5Q1ZZU3 235 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 ZNF718Q3SXZ3 478 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 TP53I3Q53FA7 332 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 C11orf71Q6IPW1 123 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 PRSS45Q7RTY3 260 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 ZCCHC24Q8N2G6 241 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 ACBD7Q8N6N7 88 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 SNX33Q8WV41 574 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 IGFBPL1Q8WX77 278 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 GGHQ92820 318 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 MRPS18AQ9NVS2 196 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 RAB26Q9ULW5 256 aa15.33■□□□□ 0.04
PDLIM7-208ENST00000493815 TBX1O43435 398 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 FAM20BO75063 409 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 RPP14O95059 124 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 GCH1P30793 250 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 ALDH3B1P43353 468 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 RIDAP52758 137 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 KLF3P57682 345 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 EGR3Q06889 387 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 MFGE8Q08431 387 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 KLHL22Q53GT1 634 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 C6orf141Q5SZD1 244 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 ZNF684Q5T5D7 378 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 YIPF7Q8N8F6 280 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 PPP1R14AQ96A00 147 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 CMBLQ96DG6 245 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 CACNG6Q9BXT2 260 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 GNG8Q9UK08 70 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 ANKRD17O75179 2603 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 TMEM269A0A1B0GVZ9 245 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 A0A1W2PPW3 197 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 B9A039 149 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 PNPP00491 289 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 KRT8P05787 483 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 DNASE1P24855 282 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 ACTC1P68032 377 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 ACTA1P68133 377 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 PSG7Q13046 419 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 EFNB3Q15768 340 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 GFOD2Q3B7J2 385 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 GLYATL3Q5SZD4 288 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 DEGS2Q6QHC5 323 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 OR5L1Q8NGL2 311 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 GTF3AQ92664 365 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 ACOXLQ9NUZ1 547 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 TAAR3PQ9P1P4 343 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 PCDHGB1Q9Y5G3 927 aa15.32■□□□□ 0.04
PDLIM7-208ENST00000493815 USF3Q68DE3 2245 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 METTL15A6NJ78 407 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 ZNF254O75437 659 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 IGHA1P01876 353 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 OR12D2P58182 307 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 PSMA6P60900 246 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 SNRPD2P62316 118 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 ZNF92Q03936 586 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 GK2Q14410 553 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 LIPNQ5VXI9 398 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 MBNL2Q5VZF2 373 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 AHSA2Q719I0 299 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 PGAM5Q96HS1 289 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 ZNF649Q9BS31 505 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 FAM206AQ9NX38 181 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 ERVK13-1Q9NX77 482 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 PSORS1C1Q9UIG5 152 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 GTF2A1LQ9UNN4 478 aa15.31■□□□□ 0.04
PDLIM7-208ENST00000493815 IGLV3-9A0A075B6K5 115 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 OVOL3O00110 214 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 NDUFS7O75251 213 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 NAT2P11245 290 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 PSMB10P40306 273 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 ETV1P50549 477 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 SELENOVP59797 346 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 ST3GAL4Q11206 333 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 MALLQ13021 153 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 OR2T2Q6IF00 324 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 OR5AS1Q8N127 324 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 OR8B12Q8NGG6 310 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 SGCDQ92629 289 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 PIGTQ969N2 578 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 COG8Q96MW5 612 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 ALG8Q9BVK2 526 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 NIPAL2Q9H841 368 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 ISG20L2Q9H9L3 353 aaKnown RBP15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 FGF20Q9NP95 211 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 VPS13CQ709C8 3753 aa15.3■□□□□ 0.04
PDLIM7-208ENST00000493815 PTGES3LE9PB15 166 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms