RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 FCN1O00602 326 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 PCSK6P29122 969 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ACAA2P42765 397 aaKnown RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 PIGPP57054 158 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 MYBPHQ13203 477 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 SHHQ15465 462 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ADIPOQQ15848 244 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 CTU2Q2VPK5 515 aaKnown RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 SLC16A12Q6ZSM3 486 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 MOB3BQ86TA1 216 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 DOLPP1Q86YN1 238 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 SLC26A10Q8NG04 563 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 MAGT1Q9H0U3 335 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 SLC45A2Q9UMX9 530 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 CLTCQ00610 1675 aaKnown RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 M0R2Z0 102 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 VAMP5O95183 116 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 T-ENOLP0DO92 83 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 CEBPBP17676 345 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 RACK1P63244 317 aaKnown RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ZNF816Q0VGE8 651 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 SEMA3BQ13214 749 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 SRSF9Q13242 221 aaKnown RBP eCLIP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 PMS2P11Q13670 270 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ELOBQ15370 118 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 NHSL2Q5HYW2 709 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 EMC4Q5J8M3 183 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ZDHHC23Q8IYP9 409 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 TMEFF1Q8IYR6 380 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 TMEM40Q8WWA1 233 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 EDEM2Q9BV94 578 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 CHST8Q9H2A9 424 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 A0A1B0GUH1 482 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 MYADML2A6NDP7 307 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 M0QZK8 103 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 FZD6O60353 706 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 GGCTO75223 188 aaKnown RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ALOX12BO75342 701 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 HOXD13P35453 343 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 PXNP49023 591 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 JAG1P78504 1218 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 DGCR2P98153 550 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 PRTGQ2VWP7 1150 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 SOWAHCQ53LP3 525 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 TGIF2LXQ8IUE1 241 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 WDR31Q8NA23 367 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 NEURL3Q96EH8 262 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 PELI1Q96FA3 418 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 PHYHIPLQ96FC7 376 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 TRMT61AQ96FX7 289 aaKnown RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ADGRG7Q96K78 797 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 RNF2Q99496 336 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 UBQLN3Q9H347 655 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 IL21Q9HBE4 155 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 TREX1Q9NSU2 369 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 TMEM129A0AVI4 362 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 CRYAAP02489 173 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 FURINP09958 794 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 GABRB1P18505 474 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 BCL3P20749 454 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 LSM11P83369 360 aaKnown RBP eCLIP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ACSM6Q6P461 480 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ANKRD16Q6P6B7 361 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ABI3BPQ7Z7G0 1075 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 ZNF547Q8IVP9 402 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 TP53INP2Q8IXH6 220 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 PFN4Q8NHR9 129 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 LKAAEAR1Q8TD35 194 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 WBP2Q969T9 261 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 EGLN2Q96KS0 407 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 NXF2Q9GZY0 626 aaKnown RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 NTNG1Q9Y2I2 539 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 TRGV10A0A0A0MS01 117 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 C5orf49A4QMS7 147 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 SDCBPO00560 298 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 IGHV3-9P01782 118 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 GLI4P10075 376 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 CYBAP13498 195 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 CD1BP29016 333 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 SLC35E4Q6ICL7 350 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 BCDIN3DQ7Z5W3 292 aaKnown RBP7.16□□□□□ -1.26
BRCA1-221ENST00000493795 CAMKMTQ7Z624 323 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 CALHM3Q86XJ0 350 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 PIANPQ8IYJ0 282 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 OR4S1Q8NGB4 309 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 UBTD2Q8WUN7 234 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 GALMQ96C23 342 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 MAP1LC3CQ9BXW4 147 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 PRO1933Q9H354 126 aa7.16□□□□□ -1.26
BRCA1-221ENST00000493795 DRGXA6NNA5 263 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 HSPB2A8KAH6 182 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 H3BNC9 293 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 CTNSO60931 367 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 LY86O95711 162 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 IL2RAP01589 272 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 JUNBP17275 347 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-221ENST00000493795 CD40P25942 277 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 HRH1P35367 487 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 SLC6A12P48065 614 aa7.15□□□□□ -1.26
BRCA1-221ENST00000493795 RPL30P62888 115 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms