RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 OR56B2PQ8NGI1 322 aa1.74□□□□□ -2.13
ITGB1-216ENST00000493758 LRRC29Q8WV35 223 aa1.74□□□□□ -2.13
ITGB1-216ENST00000493758 ZFP3Q96NJ6 502 aa1.74□□□□□ -2.13
ITGB1-216ENST00000493758 RHOXF2Q9BQY4 288 aa1.74□□□□□ -2.13
ITGB1-216ENST00000493758 PKIBQ9C010 78 aa1.74□□□□□ -2.13
ITGB1-216ENST00000493758 TOLLIPQ9H0E2 274 aa1.74□□□□□ -2.13
ITGB1-216ENST00000493758 CLDN11O75508 207 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 GLAP06280 429 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 NTF3P20783 257 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 ATP5IP56385 69 aaPredicted RBP1.73□□□□□ -2.13
ITGB1-216ENST00000493758 PNOCQ13519 176 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 CHRNA6Q15825 494 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 PRSS54Q6PEW0 395 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 CBLN2Q8IUK8 224 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 ARL6IP6Q8N6S5 226 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 OR1J4Q8NGS1 313 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 NUBPLQ8TB37 319 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 APH1BQ8WW43 257 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 DHX35Q9H5Z1 703 aaKnown RBP1.73□□□□□ -2.13
ITGB1-216ENST00000493758 TMEM27Q9HBJ8 222 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 ZNF230Q9UIE0 474 aaPredicted RBP1.73□□□□□ -2.13
ITGB1-216ENST00000493758 DENND4AQ7Z401 1863 aa1.73□□□□□ -2.13
ITGB1-216ENST00000493758 H0Y8G0 127 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 AIM2O14862 343 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 IGLV6-57P01721 117 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 ANXA5P08758 320 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 CD37P11049 281 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 RRM2P31350 389 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 SULT1E1P49888 294 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 ACTR3P61158 418 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 RPS23P62266 143 aaKnown RBP1.72□□□□□ -2.13
ITGB1-216ENST00000493758 PPM1LQ5SGD2 360 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 SLC8B1Q6J4K2 584 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 CSGALNACT2Q8N6G5 542 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 ACMSDQ8TDX5 336 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 ELMO1Q92556 727 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 BTN2A3PQ96KV6 586 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 FHOD3Q2V2M9 1422 aa1.72□□□□□ -2.13
ITGB1-216ENST00000493758 PLPP1O14494 284 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 CLOCKO15516 846 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 FLOT1O75955 427 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 INAFM2P0DMQ5 153 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 ZNF24P17028 368 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 OTX1P32242 354 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-216ENST00000493758 SYKP43405 635 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 UBE2E1P51965 193 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 PRMT2P55345 433 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 SEMG2Q02383 582 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 TGM3Q08188 693 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 XKR7Q5GH72 579 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 REEP3Q6NUK4 255 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 SLC16A14Q7RTX9 510 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 MRPL55Q7Z7F7 128 aaKnown RBP1.71□□□□□ -2.14
ITGB1-216ENST00000493758 ERO1BQ86YB8 467 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 FAM71AQ8IYT1 594 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 C19orf18Q8NEA5 215 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 OR6Q1Q8NGQ2 317 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 OR1L1Q8NH94 360 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 FBXO32Q969P5 355 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 NRBF2Q96F24 287 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 CSNK1G1Q9HCP0 422 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 SLC17A7Q9P2U7 560 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 SRCAPQ6ZRS2 3230 aa1.71□□□□□ -2.14
ITGB1-216ENST00000493758 TRBV11-1A0A0K0K1C0 115 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 GOLGA6L4A6NEF3 574 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 NDUFC2-KCTD14E9PQ53 114 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 OR7C2O60412 319 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 HTR1DP28221 377 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 RBMY1FQ15415 496 aaKnown RBP1.7□□□□□ -2.14
ITGB1-216ENST00000493758 C22orf42Q6IC83 251 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 MED27Q6P2C8 311 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 DEGS2Q6QHC5 323 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 ADM2Q7Z4H4 148 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 NANOGNBQ7Z5D8 188 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 CMC1Q7Z7K0 106 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 OR5K2Q8NHB8 316 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 EEF1AKMT3Q96AZ1 226 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 TPD52L3Q96J77 140 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 RNF145Q96MT1 663 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 SHANK2-AS3Q9BTD1 123 aa1.7□□□□□ -2.14
ITGB1-216ENST00000493758 MYOZ1Q9NP98 299 aaPredicted RBP1.7□□□□□ -2.14
ITGB1-216ENST00000493758 OTOGLQ3ZCN5 2332 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 OR6C70A6NIJ9 312 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.69□□□□□ -2.14
ITGB1-216ENST00000493758 DNALI1O14645 258 aaPredicted RBP1.69□□□□□ -2.14
ITGB1-216ENST00000493758 DEDDO75618 318 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 OR2J3O76001 311 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 TROVE2P10155 538 aaKnown RBP eCLIP1.69□□□□□ -2.14
ITGB1-216ENST00000493758 TAGLN2P37802 199 aaKnown RBP1.69□□□□□ -2.14
ITGB1-216ENST00000493758 CCNG1P51959 295 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 ZNF121P58317 390 aaPredicted RBP1.69□□□□□ -2.14
ITGB1-216ENST00000493758 TRAM2Q15035 370 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 PSMD5Q16401 504 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 SLC25A35Q3KQZ1 300 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 CEP55Q53EZ4 464 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 SMARCD3Q6STE5 483 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 RTL4Q6ZR62 310 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 FAM228AQ86W67 206 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 CMTM1Q8IZ96 169 aa1.69□□□□□ -2.14
ITGB1-216ENST00000493758 CBR4Q8N4T8 237 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms