RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 RPS2P15880 293 aaKnown RBP12.28□□□□□ -0.44
ATG4B-223ENST00000493618 ZNF823P16415 610 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 FPR2P25090 351 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 HOXA4Q00056 320 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-223ENST00000493618 GK2Q14410 553 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-223ENST00000493618 KLF17Q5JT82 389 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-223ENST00000493618 COLCA1Q6ZS62 124 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 PIGWQ7Z7B1 504 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 BCL6BQ8N143 479 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-223ENST00000493618 MUC20Q8N307 709 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-223ENST00000493618 C19orf18Q8NEA5 215 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 PROKR2Q8NFJ6 384 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 OR52L1Q8NGH7 329 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 OR8D4Q8NGM9 314 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 OR10S1Q8NGN2 331 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 OR9Q1Q8NGQ5 310 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 DVL3Q92997 716 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-223ENST00000493618 DUX5Q96PT3 197 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 RBM4Q9BWF3 364 aaKnown RBP12.28□□□□□ -0.44
ATG4B-223ENST00000493618 TMEM165Q9HC07 324 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 ZNF69Q9UC07 566 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 OR5V1Q9UGF6 321 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 LYVE1Q9Y5Y7 322 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 CDH10Q9Y6N8 788 aa12.28□□□□□ -0.44
ATG4B-223ENST00000493618 TMEM89A2RUT3 159 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 C5orf63A6NC05 138 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 A8MXK9 166 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 BHLHE40O14503 412 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 DCTN3O75935 186 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 GASTP01350 101 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 WNT2P09544 360 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 MALLQ13021 153 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 PRAMEF6Q5VXH4 476 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 KLBQ86Z14 1044 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 SLC37A3Q8NCC5 494 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 OR4C15Q8NGM1 316 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 OR2AE1Q8NHA4 323 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 SPRYD4Q8WW59 207 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-223ENST00000493618 POP5Q969H6 163 aaKnown RBP12.27□□□□□ -0.45
ATG4B-223ENST00000493618 TMEM246Q9BRR3 403 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 MRI1Q9BV20 369 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 SSBP3Q9BWW4 388 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-223ENST00000493618 UFSP2Q9NUQ7 469 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 TBC1D23Q9NUY8 699 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 VNN3Q9NY84 501 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 NUP50Q9UKX7 468 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 POLR3KQ9Y2Y1 108 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-223ENST00000493618 N6AMT1Q9Y5N5 214 aa12.27□□□□□ -0.45
ATG4B-223ENST00000493618 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-223ENST00000493618 IFNL4K9M1U5 179 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 M0R135 149 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 KRT36O76013 467 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 CCNB2O95067 398 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 GYPBP06028 91 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 CD80P33681 288 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 TPTEP56180 551 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 GNB2P62879 340 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 UBA52P62987 128 aaKnown RBP12.26□□□□□ -0.45
ATG4B-223ENST00000493618 ECH1Q13011 328 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 MAB21L1Q13394 359 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 LYPD2Q6UXB3 125 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 PGAP1Q75T13 922 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 MRPL21Q7Z2W9 205 aaKnown RBP12.26□□□□□ -0.45
ATG4B-223ENST00000493618 C3orf56Q8N813 242 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 ZNF799Q96GE5 643 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 DDOQ99489 341 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 NDE1Q9NXR1 346 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 LRCH1Q9Y2L9 728 aa12.26□□□□□ -0.45
ATG4B-223ENST00000493618 TCRBV5S2A0A599 114 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 LRRC30A6NM36 301 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 B2RBV5 119 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 FAM20BO75063 409 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 SOX14O95416 240 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 SPARCP09486 303 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 IGHV4-38-2P0DP08 117 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 IRF2P14316 349 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 CA6P23280 308 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 HMGA2P52926 109 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 OR8G1Q15617 311 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 MPPED2Q15777 294 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 ZNF404Q494X3 552 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 GLYATL3Q5SZD4 288 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 ZNF362Q5T0B9 420 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-223ENST00000493618 ZNF770Q6IQ21 691 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-223ENST00000493618 RPL13AP3Q6NVV1 102 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 RBMS3Q6XE24 437 aaKnown RBP12.25□□□□□ -0.45
ATG4B-223ENST00000493618 SPATC1Q76KD6 591 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 DCXRQ7Z4W1 244 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 BOLLQ8N9W6 283 aaKnown RBP12.25□□□□□ -0.45
ATG4B-223ENST00000493618 ZNF511Q8NB15 262 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 AQP11Q8NBQ7 271 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 OR2T4Q8NH00 348 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 OR4Q3Q8NH05 313 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 SPTSSAQ969W0 71 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 NEIL1Q96FI4 390 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-223ENST00000493618 ZNF48Q96MX3 618 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-223ENST00000493618 TSSK6Q9BXA6 273 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 DDX28Q9NUL7 540 aaKnown RBP12.25□□□□□ -0.45
ATG4B-223ENST00000493618 ARMC1Q9NVT9 282 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms