RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 GDF1P27539 372 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 FMO3P31513 532 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 NAMPTP43490 491 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 LIM2P55344 173 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 TAS2R19P59542 299 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 ZBED5Q49AG3 693 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 SPESP1Q6UW49 350 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 GPRIN3Q6ZVF9 776 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 GKN2Q86XP6 184 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 POM121L12Q8N7R1 296 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 OR1N2Q8NGR9 330 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 ZPLD1Q8TCW7 415 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 PIH1D2Q8WWB5 315 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 CERS2Q96G23 380 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 DNAJC1Q96KC8 554 aaKnown RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 KIR2DL4Q99706 377 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 ZNF670Q9BS34 389 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 API5Q9BZZ5 524 aaKnown RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 MYEF2Q9P2K5 600 aaKnown RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 ZMAT5Q9UDW3 170 aaKnown RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 APOBEC3BQ9UH17 382 aaKnown RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 LSM7Q9UK45 103 aaKnown RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 TRAV25A0A0B4J276 109 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 A0A1W2PRD5 423 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 BCKDKO14874 412 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 CTAG2O75638 210 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 TBX6O95947 436 aaPredicted RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 IGHV4-34P06331 123 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 GABRR2P28476 465 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 VHLP40337 213 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 SLC1A2P43004 574 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 CSNK1EP49674 416 aaKnown RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 TDGF1P3P51864 188 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 CRIP2P52943 208 aaPredicted RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 CLDN8P56748 225 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 STXBP1P61764 594 aaKnown RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 FAM120AOSQ5T036 256 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 THOC7Q6I9Y2 204 aaKnown RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 SSX8Q7RTT4 187 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 RARRES2Q99969 163 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 RBM4BQ9BQ04 359 aaKnown RBP2.36□□□□□ -2.03
SNX13-209ENST00000492626 YIPF3Q9GZM5 350 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 B3GNT2Q9NY97 397 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 ADA2Q9NZK5 511 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 ABCA12Q86UK0 2595 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 REV3LO60673 3130 aa2.36□□□□□ -2.03
SNX13-209ENST00000492626 AGPAT2O15120 278 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 CSTAP01040 98 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 APOA1P02647 267 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 GIMD1P0DJR0 217 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 PSMB1P20618 241 aaKnown RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 COX7A1P24310 79 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 SLC26A3P40879 764 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 CDKN1BP46527 198 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 NSDHLQ15738 373 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 NSUN5P1Q3KNT7 163 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 HIKESHIQ53FT3 197 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 FBXO48Q5FWF7 155 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 STUMQ69YW2 141 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 ANKRD26P1Q6NSI1 321 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 TRIM40Q6P9F5 258 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 TMEM135Q86UB9 458 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 ZNF546Q86UE3 836 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 C17orf82Q86X59 251 aaPredicted RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 ZNF740Q8NDX6 193 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 FAM110BQ8TC76 370 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 PDCD6IPQ8WUM4 868 aaKnown RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 ITCHQ96J02 903 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 MS4A4EQ96PG1 132 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 TBX15Q96SF7 602 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 Q9H3A6 140 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 MRPS30Q9NP92 439 aaKnown RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 ZNF282Q9UDV7 671 aaPredicted RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 RAI1Q7Z5J4 1906 aaPredicted RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 KIF26BQ2KJY2 2108 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 IGLV8-61A0A075B6I0 122 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 IGHV3OR16-13A0A075B7E8 117 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 A8MUA0 341 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 TEX46H3BTG2 121 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 TNFSF11O14788 317 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 TCF21O43680 179 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 TEAD1P28347 426 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 DDOSTP39656 456 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 CCNJQ5T5M9 372 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 OR10H4Q8NGA5 316 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 MAGEB18Q96M61 343 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 ZYG11BQ9C0D3 744 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 EHD1Q9H4M9 534 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 NUFIP1Q9UHK0 495 aaKnown RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 A0A1W2PNU3 283 aaPredicted RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 LYPLA2O95372 231 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 CISD3P0C7P0 127 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 IL2RGP31785 369 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 SSR4P51571 173 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 RPS14P62263 151 aaKnown RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 PAX2Q02962 417 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 ELOCQ15369 112 aa2.35□□□□□ -2.03
SNX13-209ENST00000492626 MRPL23Q16540 153 aaKnown RBP2.35□□□□□ -2.03
SNX13-209ENST00000492626 AGBL2Q5U5Z8 902 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms