RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 OR6N1Q8NGY5 312 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 TTC9Q92623 222 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 SFXN2Q96NB2 322 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 SELENOIQ9C0D9 397 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 GPN1Q9HCN4 374 aaPredicted RBP11.02□□□□□ -0.64
HMGN1-220ENST00000492280 OPN4Q9UHM6 478 aa11.02□□□□□ -0.64
HMGN1-220ENST00000492280 TNRC6BQ9UPQ9 1833 aaKnown RBP11.02□□□□□ -0.65
HMGN1-220ENST00000492280 D6RAR5 112 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 L7N2F9 121 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 RAB27BO00194 218 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 TOX3O15405 576 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-220ENST00000492280 KCNAB3O43448 404 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 AQP8O94778 261 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 CYB5AP00167 134 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 LPLP06858 475 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 ATXN7L3Q14CW9 347 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-220ENST00000492280 MFSD13AQ14CX5 517 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 PCK2Q16822 640 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 CDNFQ49AH0 187 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 TMEM244Q5VVB8 128 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 C5orf46Q6UWT4 87 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 TRAPPC6BQ86SZ2 158 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 BPIFB2Q8N4F0 458 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 OR1M1Q8NGA1 313 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 MAFIPQ8WZ33 124 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 EDAQ92838 391 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF416Q9BWM5 594 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 HS3ST3B1Q9Y662 390 aa11.02□□□□□ -0.65
HMGN1-220ENST00000492280 CACNA1HO95180 2353 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 A0A1B0GTI1 187 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 TMEM82A0PJX8 343 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 UBE2QL1A1L167 161 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 F5H5K5 113 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 I3L521 148 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 LDLRAD4O15165 306 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 DBHP09172 617 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 UBCP0CG48 685 aaKnown RBP11.01□□□□□ -0.65
HMGN1-220ENST00000492280 SLC6A9P48067 706 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 MMP16P51512 607 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 SUMO3P55854 103 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-220ENST00000492280 TMEM81Q6P7N7 255 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF704Q6ZNC4 412 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-220ENST00000492280 ANGPTL5Q86XS5 388 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF283Q8N7M2 679 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 OR10K1Q8NGX5 313 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 OR2AJ1Q8NGZ0 328 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 PRR13Q9NZ81 148 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 OR5H15A6NDH6 313 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF736B4DX44 427 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-220ENST00000492280 KLF7O75840 302 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-220ENST00000492280 DKK1O94907 266 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 MPIG6BO95866 241 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 CX3CR1P49238 355 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 TRIM61Q5EBN2 209 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 BEX5Q5H9J7 111 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 ATPAF1Q5TC12 328 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-220ENST00000492280 COMMD7Q86VX2 200 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 OR13C8Q8NGS7 320 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 ELP5Q8TE02 316 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 CCDC120Q96HB5 630 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 SEC22AQ96IW7 307 aa11.01□□□□□ -0.65
HMGN1-220ENST00000492280 GPN3Q9UHW5 284 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-220ENST00000492280 CNOT1A5YKK6 2376 aaKnown RBP11.01□□□□□ -0.65
HMGN1-220ENST00000492280 A0A0A6YYD4 124 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 A0A1W2PNV4 684 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 PLSCR5A0PG75 271 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 OR4E1P0C645 316 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 COX6A1P12074 109 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 GABRA1P14867 456 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 CPN1P15169 458 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 PNLIPP16233 465 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF20P17024 532 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 TAS2R19P59542 299 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 GABREP78334 506 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 LYPD6Q86Y78 171 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF584Q8IVC4 421 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 DEFB123Q8N688 67 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 RNF138Q8WVD3 245 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 POTEKPQ9BYX7 375 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 ARL6Q9H0F7 186 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 C19orf25Q9UFG5 118 aaPredicted RBP11□□□□□ -0.65
HMGN1-220ENST00000492280 VSIG4Q9Y279 399 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 MAP1BP46821 2468 aaKnown RBP11□□□□□ -0.65
HMGN1-220ENST00000492280 IGHV1-45A0A0A0MS14 117 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF878C9JN71 531 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 TNFSF11O14788 317 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 ISG15P05161 165 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 GIPP09681 153 aaPredicted RBP11□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF735P0CB33 412 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 HRH1P35367 487 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF93P35789 620 aaPredicted RBP11□□□□□ -0.65
HMGN1-220ENST00000492280 ACTBP60709 375 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 ACTG1P63261 375 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 RHOUQ7L0Q8 258 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 TMEM156Q8N614 296 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 CASTOR1Q8WTX7 329 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 MRGPRFQ96AM1 343 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 CXorf58Q96LI9 332 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 B3GNT2Q9NY97 397 aa11□□□□□ -0.65
HMGN1-220ENST00000492280 B3GALT1Q9Y5Z6 326 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms