RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 JAZF1Q86VZ6 243 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 KLBQ86Z14 1044 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 OR5AS1Q8N127 324 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 LNX2Q8N448 690 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 BPIFB2Q8N4F0 458 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 LINC00471Q8N535 108 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 ATG16L2Q8NAA4 619 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 OR10AD1Q8NGE0 317 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF420Q8TAQ5 688 aaPredicted RBP7□□□□□ -1.29
SMARCB1-207ENST00000491967 GNPDA2Q8TDQ7 276 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNRF4Q8WWF5 429 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 RAB40AQ8WXH6 277 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 GCDHQ92947 438 aaPredicted RBP7□□□□□ -1.29
SMARCB1-207ENST00000491967 MCUR1Q96AQ8 359 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 ZMYND19Q96E35 227 aaPredicted RBP7□□□□□ -1.29
SMARCB1-207ENST00000491967 NSMCE2Q96MF7 247 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF48Q96MX3 618 aaPredicted RBP7□□□□□ -1.29
SMARCB1-207ENST00000491967 PITX2Q99697 317 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 TMEM246Q9BRR3 403 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 BTBD10Q9BSF8 475 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 IFT27Q9BW83 186 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 HCAR1Q9BXC0 346 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 PLA2G12AQ9BZM1 189 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 NSRP1Q9H0G5 558 aaKnown RBP7□□□□□ -1.29
SMARCB1-207ENST00000491967 RERGLQ9H628 205 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 RPRD1BQ9NQG5 326 aaKnown RBP7□□□□□ -1.29
SMARCB1-207ENST00000491967 ARL8BQ9NVJ2 186 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF69Q9UC07 566 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 MIOXQ9UGB7 285 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 ARL2BPQ9Y2Y0 163 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 LYVE1Q9Y5Y7 322 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 CDH10Q9Y6N8 788 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 IGHV2-70DA0A0C4DH43 119 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 TCRBV5S2A0A599 114 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 F5H5K5 113 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 GMDSO60547 372 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 RGS9O75916 674 aaPredicted RBP6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 GASTP01350 101 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 PSKH1P11801 424 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 ANOS1P23352 680 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 SLC25A1P53007 311 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 C11orf91Q3C1V1 193 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 ESCO2Q56NI9 601 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 AWAT1Q58HT5 328 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 DRAM2Q6UX65 266 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 LRRN1Q6UXK5 716 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 CD300LDQ6UXZ3 194 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 RASSF6Q6ZTQ3 369 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 MOGAT3Q86VF5 341 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 LINC00346Q8IVM7 164 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 ZDHHC21Q8IVQ6 265 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 BCL6BQ8N143 479 aaPredicted RBP6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 ARHGAP24Q8N264 748 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 SIGLECL1Q8N7X8 197 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 SDR9C7Q8NEX9 313 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 OR52E2Q8NGJ4 325 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 OR8D4Q8NGM9 314 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 OR2AJ1Q8NGZ0 328 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 OR2T4Q8NH00 348 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 SGMS2Q8NHU3 365 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 SPSB4Q96A44 273 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 NEIL1Q96FI4 390 aaPredicted RBP6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF747Q9BV97 191 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 SSBP3Q9BWW4 388 aaPredicted RBP6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 DGCR6LQ9BY27 220 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 SLC22A4Q9H015 551 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 MAGIXQ9H6Y5 334 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 EGLN3Q9H6Z9 239 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 ZMAT3Q9HA38 289 aaKnown RBP6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 NDE1Q9NXR1 346 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 MRPL15Q9P015 296 aaKnown RBP6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 ACTR3BQ9P1U1 418 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 TMCC3Q9ULS5 477 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 POLR1DQ9Y2S0 133 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 PPIAL4AQ9Y536 164 aa6.99□□□□□ -1.29
SMARCB1-207ENST00000491967 C5orf63A6NC05 138 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 LRRC30A6NM36 301 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 CD300LBA8K4G0 201 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 M0R135 149 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 CYB5R3P00387 301 aaPredicted RBP6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 LHBP01229 141 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 LCATP04180 440 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 HLA-DPB1P04440 258 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 RNASE1P07998 156 aaKnown RBP6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 CENPAP49450 140 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 TPTEP56180 551 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 BPIFB3P59826 476 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 ACTG1P63261 375 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF92Q03936 586 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 MPPED2Q15777 294 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 SNAI3Q3KNW1 292 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 PRR31Q5SQ13 230 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 FAM201AQ5SY85 155 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 SLC35F1Q5T1Q4 408 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 LINC01590Q5TEZ4 76 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 LCN8Q6JVE9 175 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 C16orf89Q6UX73 402 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 DCDC5Q6ZRR9 648 aa6.98□□□□□ -1.29
SMARCB1-207ENST00000491967 PGAP1Q75T13 922 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 253.2 ms