RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 TBPL2Q6SJ96 375 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 OAFQ86UD1 273 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 NAA40Q86UY6 237 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 CELF2-AS1Q8N7Q2 184 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 FAM156AQ8NDB6 213 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 ZNF583Q96ND8 569 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 ECSITQ9BQ95 431 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 TMBIM4Q9HC24 238 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 TMEM100Q9NV29 134 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 ETAA1Q9NY74 926 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 ATPIF1Q9UII2 106 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 DNAH9Q9NYC9 4486 aa10.89□□□□□ -0.67
USF1-206ENST00000491629 A0A1B0GW55 424 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 DCTN6O00399 190 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 ANGPT2O15123 496 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 PIN1P1O15428 100 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 SLC16A7O60669 478 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 LIPFP07098 398 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 CD14P08571 375 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 DUX4L2P0CJ85 424 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 DUX4L3P0CJ86 424 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 DUX4L4P0CJ87 422 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 DUX4L5P0CJ88 424 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 DUX4L6P0CJ89 424 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 DUX4L7P0CJ90 424 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 YAP1P46937 504 aaKnown RBP10.88□□□□□ -0.67
USF1-206ENST00000491629 SLC9A3P48764 834 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 DLX1P56177 255 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 ST3GAL3Q11203 375 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 GK2Q14410 553 aaPredicted RBP10.88□□□□□ -0.67
USF1-206ENST00000491629 KCNMB1Q16558 191 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 METTL11BQ5VVY1 283 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 CD276Q5ZPR3 534 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 CORO6Q6QEF8 472 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 DUX4L9Q6RFH8 374 aaPredicted RBP10.88□□□□□ -0.67
USF1-206ENST00000491629 GDPGP1Q6ZNW5 385 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 PTCHD4Q6ZW05 846 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 CROCCP2Q86T23 111 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 OR5L1Q8NGL2 311 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 PRRC1Q96M27 445 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 SYT4Q9H2B2 425 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 MMADHCQ9H3L0 296 aaPredicted RBP10.88□□□□□ -0.67
USF1-206ENST00000491629 ZNRD1Q9P1U0 126 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 DUX4Q9UBX2 424 aa10.88□□□□□ -0.67
USF1-206ENST00000491629 A0A087WUU8 490 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 MEGF11A6BM72 1044 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 EFCAB9A8MZ26 197 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 LGALS8O00214 317 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 ADAM20O43506 726 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 OR10H3O60404 316 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 PTBP3O95758 552 aaKnown RBP10.87□□□□□ -0.67
USF1-206ENST00000491629 OPN1MWP04001 364 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 OPN1MW2P0DN77 364 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 OPN1MW3P0DN78 364 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 GPR4P46093 362 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 FXYD6P3P58550 94 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 POU4F2Q12837 409 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 FAM189A2Q15884 450 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 CYBRD1Q53TN4 286 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 SLC35E4Q6ICL7 350 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 BTN2A1Q7KYR7 527 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 VMO1Q7Z5L0 202 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 FAM90A1Q86YD7 464 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 GLB1L2Q8IW92 636 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 BOLLQ8N9W6 283 aaKnown RBP10.87□□□□□ -0.67
USF1-206ENST00000491629 SCCPDHQ8NBX0 429 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 ERGIC1Q969X5 290 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 TSSK2Q96PF2 358 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 COQ7Q99807 217 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 NUAK2Q9H093 628 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 RERGLQ9H628 205 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 VSX1Q9NZR4 365 aaPredicted RBP10.87□□□□□ -0.67
USF1-206ENST00000491629 GMPR2Q9P2T1 348 aaKnown RBP10.87□□□□□ -0.67
USF1-206ENST00000491629 ERVK-18Q9QC07 812 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 RNF7Q9UBF6 113 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 GRHPRQ9UBQ7 328 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 SIGLEC9Q9Y336 463 aa10.87□□□□□ -0.67
USF1-206ENST00000491629 HTR3EA5X5Y0 456 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 AHCYL1O43865 530 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 PTP4A3O75365 173 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 KHDRBS3O75525 346 aaKnown RBP10.86□□□□□ -0.67
USF1-206ENST00000491629 GYPAP02724 150 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 ACSM4P0C7M7 580 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 IRF2P14316 349 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 KRR1Q13601 381 aaKnown RBP10.86□□□□□ -0.67
USF1-206ENST00000491629 ANKDD1AQ495B1 522 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 ZBED5Q49AG3 693 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 DHRS7BQ6IAN0 325 aaPredicted RBP10.86□□□□□ -0.67
USF1-206ENST00000491629 ZNF826PQ6ZT77 177 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 TSEN54Q7Z6J9 526 aaKnown RBP10.86□□□□□ -0.67
USF1-206ENST00000491629 VTCN1Q7Z7D3 282 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 OFCC1Q8IZS5 231 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 PNLDC1Q8NA58 520 aaKnown RBP10.86□□□□□ -0.67
USF1-206ENST00000491629 OR11L1Q8NGX0 322 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 PPP1R35Q8TAP8 253 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 TSPEARQ8WU66 669 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 ZNF570Q96NI8 536 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 DPAGT1Q9H3H5 408 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 RABEP2Q9H5N1 569 aa10.86□□□□□ -0.67
USF1-206ENST00000491629 NMNAT1Q9HAN9 279 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms