RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CYSLTR2Q9NS75 346 aa7.44□□□□□ -1.22
HDAC3-211ENST00000491581 ARMC1Q9NVT9 282 aa7.44□□□□□ -1.22
HDAC3-211ENST00000491581 TMCC3Q9ULS5 477 aa7.44□□□□□ -1.22
HDAC3-211ENST00000491581 SAMD4AQ9UPU9 718 aaKnown RBP7.44□□□□□ -1.22
HDAC3-211ENST00000491581 AUP1Q9Y679 476 aa7.44□□□□□ -1.22
HDAC3-211ENST00000491581 U3KQV3 271 aa7.44□□□□□ -1.22
HDAC3-211ENST00000491581 NBEAL1Q6ZS30 2694 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 TRAV40A0A0B4J280 105 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 TCRBV5S2A0A599 114 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 FAM183AA6NL82 134 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 IQCF6A8MYZ5 107 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 H3BSA7 217 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 BHLHE40O14503 412 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 FOXH1O75593 365 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 FABP3P05413 133 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 RAC2P15153 192 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 RPS2P15880 293 aaKnown RBP7.43□□□□□ -1.22
HDAC3-211ENST00000491581 FPR3P25089 353 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 SLC6A6P31641 620 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 PRKXP51817 358 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 GNGT1P63211 74 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 MS4A2Q01362 244 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 TRAP1Q12931 704 aaKnown RBP7.43□□□□□ -1.22
HDAC3-211ENST00000491581 CRMP1Q14194 572 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 KRT72Q14CN4 511 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 TUSC1Q2TAM9 212 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 ARMCX4Q5H9R4 360 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 DMRTC1Q5HYR2 192 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 HIST2H2BDQ6DRA6 164 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 ARL9Q6T311 187 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 COLCA1Q6ZS62 124 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 WDR86Q86TI4 376 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 ADCK1Q86TW2 530 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 ZBTB46Q86UZ6 589 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 KLBQ86Z14 1044 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 PDZD9Q8IXQ8 264 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 PGAM4Q8N0Y7 254 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 KLHL36Q8N4N3 616 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 IQCF1Q8N6M8 205 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 SLC37A3Q8NCC5 494 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 GJC3Q8NFK1 279 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 OR4C15Q8NGM1 316 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 APOBEC3DQ96AK3 386 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-211ENST00000491581 DACT3Q96B18 629 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-211ENST00000491581 CMTM5Q96DZ9 223 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 NSMCE2Q96MF7 247 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 ZNF582Q96NG8 517 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-211ENST00000491581 COQ7Q99807 217 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 ATF6BQ99941 703 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 CYB5R1Q9UHQ9 305 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 AP3M1Q9Y2T2 418 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 LYVE1Q9Y5Y7 322 aa7.43□□□□□ -1.22
HDAC3-211ENST00000491581 HTR3EA5X5Y0 456 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 TRIM77I1YAP6 450 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 J3QLI3 93 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 AHCYL1O43865 530 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 RENP00797 406 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 SPARCP09486 303 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 HSD17B1P14061 328 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 TNFRSF1AP19438 455 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 TNFSF4P23510 183 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 PRDX6P30041 224 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 LIPAP38571 399 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 MDH2P40926 338 aaKnown RBP7.42□□□□□ -1.22
HDAC3-211ENST00000491581 RAD23AP54725 363 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 PAX8Q06710 450 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 TSPAN31Q12999 210 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 ZNF404Q494X3 552 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 TMEM155Q4W5P6 130 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 ESCO2Q56NI9 601 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 ZMAT1Q5H9K5 638 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 ZNF770Q6IQ21 691 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-211ENST00000491581 SLC27A4Q6P1M0 643 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 UNQ6126/PRO20091Q6UXV3 157 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 ZNF841Q6ZN19 808 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 DCXRQ7Z4W1 244 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 CPLX4Q7Z7G2 160 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 TMEM179BQ7Z7N9 219 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 HS3ST5Q8IZT8 346 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 PARP8Q8N3A8 854 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 FITM2Q8N6M3 262 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 AQP11Q8NBQ7 271 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 OR13G1Q8NGZ3 307 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 GNPDA2Q8TDQ7 276 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 DIRC2Q96SL1 478 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 NIPSNAP1Q9BPW8 284 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 SSBP3Q9BWW4 388 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-211ENST00000491581 SUCNR1Q9BXA5 334 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 HDHD2Q9H0R4 259 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 IL1RAPQ9NPH3 570 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 MED4Q9NPJ6 270 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 CENPMQ9NSP4 180 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 TMEM100Q9NV29 134 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 MRGBPQ9NV56 204 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 ZNF319Q9P2F9 582 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 DNAJB11Q9UBS4 358 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 CGGBP1Q9UFW8 167 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-211ENST00000491581 TAGLN3Q9UI15 199 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 MAGEL2Q9UJ55 1249 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 NUP50Q9UKX7 468 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms