RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 NSL1Q96IY1 281 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 MAP6Q96JE9 813 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 JMJD8Q96S16 334 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 SLC6A7Q99884 636 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 SLC30A2Q9BRI3 323 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 SUCNR1Q9BXA5 334 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 PLA2G12AQ9BZM1 189 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 MUC13Q9H3R2 512 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 MAGIXQ9H6Y5 334 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 PNRC2Q9NPJ4 139 aaKnown RBP6.95□□□□□ -1.3
LSM2-213ENST00000491421 TBC1D23Q9NUY8 699 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 TMEM100Q9NV29 134 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 MRPL22Q9NWU5 206 aaKnown RBP6.95□□□□□ -1.3
LSM2-213ENST00000491421 IL20Q9NYY1 176 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 OR5V1Q9UGF6 321 aa6.95□□□□□ -1.3
LSM2-213ENST00000491421 TVP23AA6NH52 213 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 CEACAM18A8MTB9 384 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 F5H0A9 414 aaPredicted RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 TRIM77I1YAP6 450 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 M0R135 149 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 MLNRO43193 412 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 ZNF205O95201 554 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 SOX14O95416 240 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 CYB5R3P00387 301 aaPredicted RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 FSHBP01225 129 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 HLA-DPB1P04440 258 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 RPS2P15880 293 aaKnown RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 FPR2P25090 351 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 RPS27P42677 84 aaKnown RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 SLC6A9P48067 706 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 PPP1R8Q12972 351 aaKnown RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 TRIM25Q14258 630 aaKnown RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 FAM98BQ52LJ0 330 aaKnown RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 ARMCX4Q5H9R4 360 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 LCN8Q6JVE9 175 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 C12orf54Q6X4T0 127 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 MRPL21Q7Z2W9 205 aaKnown RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 NAA40Q86UY6 237 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 MOGAT3Q86VF5 341 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 C1orf87Q8N0U7 546 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 LNX2Q8N448 690 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 SLC37A3Q8NCC5 494 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 DEFB108BQ8NET1 73 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 OR2T33Q8NG76 320 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 OR51L1Q8NGJ5 315 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 OR10S1Q8NGN2 331 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 OR9Q1Q8NGQ5 310 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 SPRYD4Q8WW59 207 aaPredicted RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 C22orf15Q8WYQ4 148 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 SLCO4A1Q96BD0 722 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 ZNF799Q96GE5 643 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 CCT8L2Q96SF2 557 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 DDOQ99489 341 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 ARPC5LQ9BPX5 153 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 COPS4Q9BT78 406 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 MRI1Q9BV20 369 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 TSSK6Q9BXA6 273 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 REEP1Q9H902 201 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 MMP26Q9NRE1 261 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 BAIAP2Q9UQB8 552 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 LRCH1Q9Y2L9 728 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 SAMHD1Q9Y3Z3 626 aaKnown RBP6.94□□□□□ -1.3
LSM2-213ENST00000491421 AUP1Q9Y679 476 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 COMMD3-BMI1R4GMX3 469 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 U3KQV3 271 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 NBEAL1Q6ZS30 2694 aa6.94□□□□□ -1.3
LSM2-213ENST00000491421 A0A1B0GWJ7 208 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 RIIAD1A6NNX1 92 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 A8MXK9 166 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 TRAPPC2LH3BP13 241 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 FAM107AO95990 144 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 IFNGP01579 166 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 GYPBP06028 91 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 SPARCP09486 303 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 IRF2P14316 349 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 ZNF12P17014 697 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 CALB2P22676 271 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 CPT2P23786 658 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 FMO3P31513 532 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 GATA4P43694 442 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 RAD23AP54725 363 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 MS4A2Q01362 244 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 ZNF154Q13106 437 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 CRMP1Q14194 572 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 TAF13Q15543 124 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 OR8G1Q15617 311 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 MICAQ29983 383 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 ZNF181Q2M3W8 571 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 ZNF362Q5T0B9 420 aaPredicted RBP6.93□□□□□ -1.3
LSM2-213ENST00000491421 OR2T5Q6IEZ7 315 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 LYPD4Q6UWN0 246 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 DCXRQ7Z4W1 244 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 KLBQ86Z14 1044 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 CELF2-AS1Q8N7Q2 184 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 CCDC197Q8NCU1 140 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 OR11L1Q8NGX0 322 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 OR2T29Q8NH02 315 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 FAM216AQ8WUB2 273 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 ZNRF4Q8WWF5 429 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms