RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 LHX4Q969G2 390 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 SIRPDQ9H106 197 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 DPAGT1Q9H3H5 408 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 TRIM36Q9NQ86 728 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 UFSP2Q9NUQ7 469 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 RNF7Q9UBF6 113 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 NOP16Q9Y3C1 178 aaKnown RBP17.09■□□□□ 0.33
CLIP2-208ENST00000491075 LHFPL6Q9Y693 200 aa17.09■□□□□ 0.33
CLIP2-208ENST00000491075 A0A087WUU8 490 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 A0A0U1RQK1 487 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 J3KTA2 159 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 LGALS8O00214 317 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 GK2Q14410 553 aaPredicted RBP17.08■□□□□ 0.32
CLIP2-208ENST00000491075 MPPED2Q15777 294 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 COQ5Q5HYK3 327 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 BEND6Q5SZJ8 279 aaPredicted RBP17.08■□□□□ 0.32
CLIP2-208ENST00000491075 PRAMEF6Q5VXH4 476 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 METTL21CQ5VZV1 264 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 C16orf95Q9H693 158 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 FN3KRPQ9HA64 309 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 TMEM5Q9Y2B1 443 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 SNX13Q9Y5W8 968 aa17.08■□□□□ 0.32
CLIP2-208ENST00000491075 C5orf63A6NC05 138 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 FFAR1O14842 300 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 ADAM20O43506 726 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 NDUFA2O43678 99 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 NDUFB2O95178 105 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 PRSS12P56730 875 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 COX10Q12887 443 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 MALLQ13021 153 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 C11orf91Q3C1V1 193 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 HIST2H2BDQ6DRA6 164 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 Q6ZSV7 163 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 OR2T12Q8NG77 320 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 GPX7Q96SL4 187 aaPredicted RBP17.07■□□□□ 0.32
CLIP2-208ENST00000491075 SLC22A4Q9H015 551 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 NUAK2Q9H093 628 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 SMURF1Q9HCE7 757 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 NRIP3Q9NQ35 241 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 RPS6KA6Q9UK32 745 aa17.07■□□□□ 0.32
CLIP2-208ENST00000491075 TRAV38-1A0A0B4J264 116 aa17.06■□□□□ 0.32
CLIP2-208ENST00000491075 SOCS2O14508 198 aa17.06■□□□□ 0.32
CLIP2-208ENST00000491075 MRASO14807 208 aa17.06■□□□□ 0.32
CLIP2-208ENST00000491075 OR8G1Q15617 311 aa17.06■□□□□ 0.32
CLIP2-208ENST00000491075 KRTAP27-1Q3LI81 207 aa17.06■□□□□ 0.32
CLIP2-208ENST00000491075 SFRP4Q6FHJ7 346 aaPredicted RBP17.06■□□□□ 0.32
CLIP2-208ENST00000491075 DHRS7BQ6IAN0 325 aaPredicted RBP17.06■□□□□ 0.32
CLIP2-208ENST00000491075 DNM1P34Q6PK57 102 aa17.06■□□□□ 0.32
CLIP2-208ENST00000491075 TBPL2Q6SJ96 375 aa17.06■□□□□ 0.32
CLIP2-208ENST00000491075 RRM2BQ7LG56 351 aa17.06■□□□□ 0.32
CLIP2-208ENST00000491075 SIKE1Q9BRV8 207 aa17.06■□□□□ 0.32
CLIP2-208ENST00000491075 BBIP1A8MTZ0 92 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 C3orf80F5H4A9 247 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 IMPA2O14732 288 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 CSF1P09603 554 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 ACSM4P0C7M7 580 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 CRABP1P29762 137 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 HOXA4Q00056 320 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-208ENST00000491075 OR8B8Q15620 311 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 MEP1BQ16820 701 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 RSPO1Q2MKA7 263 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-208ENST00000491075 CORO6Q6QEF8 472 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 PTCHD4Q6ZW05 846 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 PGAP1Q75T13 922 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 VTCN1Q7Z7D3 282 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-208ENST00000491075 BOLLQ8N9W6 283 aaKnown RBP17.05■□□□□ 0.32
CLIP2-208ENST00000491075 PLPP7Q8NBV4 271 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 SPRYD4Q8WW59 207 aaPredicted RBP17.05■□□□□ 0.32
CLIP2-208ENST00000491075 ANKRD19PQ9H560 264 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 MRGBPQ9NV56 204 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 SIGLEC7Q9Y286 467 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 FAM96BQ9Y3D0 163 aa17.05■□□□□ 0.32
CLIP2-208ENST00000491075 A0A0G2JND7 137 aa17.04■□□□□ 0.32
CLIP2-208ENST00000491075 BTBD17A6NE02 478 aa17.04■□□□□ 0.32
CLIP2-208ENST00000491075 OOEPA6NGQ2 149 aa17.04■□□□□ 0.32
CLIP2-208ENST00000491075 ALX3O95076 343 aa17.04■□□□□ 0.32
CLIP2-208ENST00000491075 PTBP3O95758 552 aaKnown RBP17.04■□□□□ 0.32
CLIP2-208ENST00000491075 ECDO95905 644 aaPredicted RBP17.04■□□□□ 0.32
CLIP2-208ENST00000491075 CENPAP49450 140 aa17.04■□□□□ 0.32
CLIP2-208ENST00000491075 ARF6P62330 175 aa17.04■□□□□ 0.32
CLIP2-208ENST00000491075 ECH1Q13011 328 aa17.04■□□□□ 0.32
CLIP2-208ENST00000491075 MRPL21Q7Z2W9 205 aaKnown RBP17.04■□□□□ 0.32
CLIP2-208ENST00000491075 SLCO4A1Q96BD0 722 aa17.04■□□□□ 0.32
CLIP2-208ENST00000491075 FAM46AQ96IP4 442 aaKnown RBP17.04■□□□□ 0.32
CLIP2-208ENST00000491075 ATF6BQ99941 703 aa17.04■□□□□ 0.32
CLIP2-208ENST00000491075 ADAT1Q9BUB4 502 aaKnown RBP17.04■□□□□ 0.32
CLIP2-208ENST00000491075 INTS9Q9NV88 658 aaKnown RBP17.04■□□□□ 0.32
CLIP2-208ENST00000491075 VPREB3Q9UKI3 123 aa17.04■□□□□ 0.32
CLIP2-208ENST00000491075 CAB39Q9Y376 341 aaPredicted RBP17.04■□□□□ 0.32
CLIP2-208ENST00000491075 A0A1B0GVI7 797 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 F5H5K5 113 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 GMDSO60547 372 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 TSPAN9O75954 239 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 FBP1P09467 338 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 CA6P23280 308 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 BEAN1Q3B7T3 259 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 CFAP77Q6ZQR2 320 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 BTN2A1Q7KYR7 527 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 PIP4P2Q8N4L2 257 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms