RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 RHNO1Q9BSD3 238 aa10.96□□□□□ -0.65
LIMK1-207ENST00000491052 SMPD3Q9NY59 655 aaPredicted RBP10.96□□□□□ -0.65
LIMK1-207ENST00000491052 WARS2Q9UGM6 360 aaKnown RBP10.96□□□□□ -0.65
LIMK1-207ENST00000491052 PURGQ9UJV8 347 aaKnown RBP10.96□□□□□ -0.65
LIMK1-207ENST00000491052 IGHV4-30-2A0A087WSY4 118 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 ZSCAN5BA6NJL1 495 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 PSMD9O00233 223 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 SMAD7O15105 426 aaKnown RBP10.95□□□□□ -0.66
LIMK1-207ENST00000491052 TBX1O43435 398 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 SPRY3O43610 288 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 NCR1O76036 304 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 APOL3O95236 402 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 APOC1P02654 83 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 ALOX5APP20292 161 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 KITLGP21583 273 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 HTR1FP30939 366 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 OPRL1P41146 370 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 MAGEB1P43366 347 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 MMP15P51511 669 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 DSCR9P59020 149 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 TSTQ16762 297 aaKnown RBP10.95□□□□□ -0.66
LIMK1-207ENST00000491052 PCGF3Q3KNV8 242 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 ZMAT1Q5H9K5 638 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 OR2T2Q6IF00 324 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 KCTD18Q6PI47 426 aaPredicted RBP10.95□□□□□ -0.66
LIMK1-207ENST00000491052 LRRN1Q6UXK5 716 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 FBXW12Q6X9E4 464 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 DNM1P46Q6ZS02 220 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 KRT77Q7Z794 578 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 SLC35F2Q8IXU6 374 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 OR5AS1Q8N127 324 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 ZNF555Q8NEP9 628 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 UBASH3BQ8TF42 649 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 TRUB1Q8WWH5 349 aaKnown RBP10.95□□□□□ -0.66
LIMK1-207ENST00000491052 HAVCR1Q96D42 359 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 RDH12Q96NR8 316 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 TMUB1Q9BVT8 246 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 DCLRE1BQ9H816 532 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 ADGRL4Q9HBW9 690 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 MSL2Q9HCI7 577 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 MYOZ1Q9NP98 299 aaPredicted RBP10.95□□□□□ -0.66
LIMK1-207ENST00000491052 BRD7Q9NPI1 651 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 C8orf4Q9NR00 106 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 CYSLTR2Q9NS75 346 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 FAM118AQ9NWS6 357 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 CGGBP1Q9UFW8 167 aaPredicted RBP10.95□□□□□ -0.66
LIMK1-207ENST00000491052 TMEM14AQ9Y6G1 99 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 ABCA2Q9BZC7 2435 aa10.95□□□□□ -0.66
LIMK1-207ENST00000491052 LOC100130705A0A1B0GUX0 176 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 C5orf63A6NC05 138 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 E9PQ18 207 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 ZNF670-ZNF695F2Z2N8 137 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 H0YHG0 523 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 IGHV1-46P01743 117 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 HPXP02790 462 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 SBK2P0C263 348 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 ATP6V1E1P36543 226 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 LIPAP38571 399 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 ZNF121P58317 390 aaPredicted RBP10.94□□□□□ -0.66
LIMK1-207ENST00000491052 SNRPGP62308 76 aaKnown RBP10.94□□□□□ -0.66
LIMK1-207ENST00000491052 CCL8P80075 99 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 GK2Q14410 553 aaPredicted RBP10.94□□□□□ -0.66
LIMK1-207ENST00000491052 GLYATL3Q5SZD4 288 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 FAM57BQ71RH2 274 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 PGAP1Q75T13 922 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 RHOUQ7L0Q8 258 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 CIARTQ8N365 385 aaPredicted RBP10.94□□□□□ -0.66
LIMK1-207ENST00000491052 RFLNBQ8N5W9 214 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 PACRGLQ8N7B6 248 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 BHLHE23Q8NDY6 225 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 OR2AE1Q8NHA4 323 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 TBX5Q99593 518 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 PIMREGQ9BSJ6 248 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 SP140LQ9H930 580 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 HAO2Q9NYQ3 351 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 AASSQ9UDR5 926 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 IKZF2Q9UKS7 526 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 COPS3Q9UNS2 423 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 LRP12Q9Y561 859 aa10.94□□□□□ -0.66
LIMK1-207ENST00000491052 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.93□□□□□ -0.662e-6■■■□□ 18.2
LIMK1-207ENST00000491052 CSPG4Q6UVK1 2322 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 LYNX1G3V0Z9 82 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 PHYHO14832 338 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 CASQ2O14958 399 aaPredicted RBP10.93□□□□□ -0.66
LIMK1-207ENST00000491052 XRCC2O43543 280 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 ENTPD6O75354 484 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 LYNX1P0DP58 116 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 SELEP16581 610 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 ANOS1P23352 680 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 PSMA6P60900 246 aaKnown RBP10.93□□□□□ -0.66
LIMK1-207ENST00000491052 CXCR4P61073 352 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 ZNF92Q03936 586 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 POU4F2Q12837 409 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 TIGD6Q17RP2 521 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 GFOD2Q3B7J2 385 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 OGFRL1Q5TC84 451 aaPredicted RBP10.93□□□□□ -0.66
LIMK1-207ENST00000491052 MEDAGQ5VYS4 303 aa10.93□□□□□ -0.66
LIMK1-207ENST00000491052 ZNF322Q6U7Q0 402 aaPredicted RBP10.93□□□□□ -0.66
LIMK1-207ENST00000491052 USP51Q70EK9 711 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms