RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SMAD4Q13485 552 aaKnown RBP17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 SLC18B1Q6NT16 456 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 PRSS54Q6PEW0 395 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 CHST4Q8NCG5 386 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 OR4D6Q8NGJ1 314 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 ZNF563Q8TA94 476 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 MARCH1Q8TCQ1 289 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 C8orf33Q9H7E9 229 aaPredicted RBP17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 KIF26BQ2KJY2 2108 aa17.3■□□□□ 0.36
SNAPC3-206ENST00000490969 TXNL1O43396 289 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 FBXO24O75426 580 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 IFNA6P05013 189 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 RAB6AP20340 208 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 C1orf100Q5SVJ3 147 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 CATSPERDQ86XM0 798 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 ZNF440Q8IYI8 595 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 BCORP1Q8N888 145 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 KTI12Q96EK9 354 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 AQP10Q96PS8 301 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 RPS10P5Q9NQ39 176 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 TIMM10BQ9Y5J6 103 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 SPARCP09486 303 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 LYL1P12980 280 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 ZNF14P17017 642 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 TAS2R31P59538 309 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 ZNF761Q86XN6 746 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 SLC39A7Q92504 469 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 ZNF775Q96BV0 537 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 KIRREL1Q96J84 757 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 AKR1E2Q96JD6 320 aa17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 PHF7Q9BWX1 381 aaPredicted RBP17.29■□□□□ 0.36
SNAPC3-206ENST00000490969 HTR3BO95264 441 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 SERPINA5P05154 406 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 PVRP15151 417 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 NME2P22392 152 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 MRPS21P82921 87 aaKnown RBP17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 ROM1Q03395 351 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 BTNL8Q6UX41 500 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 OR13C3Q8NGS6 347 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 OR2M4Q96R27 311 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 GAS2L1Q99501 681 aaPredicted RBP17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 APOOQ9BUR5 198 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 SLC5A7Q9GZV3 580 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 ARHGEF17Q96PE2 2063 aaPredicted RBP17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 LOC390937A0A1W2PQ73 354 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 OIP5O43482 229 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 CT45A8P0DMV1 189 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 CT45A9P0DMV2 189 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 RIDAP52758 137 aaKnown RBP17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 RAB38P57729 211 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 SRSF5Q13243 272 aaKnown RBP17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 CT45A2Q5DJT8 189 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 ACER2Q5QJU3 275 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 EIF5AL1Q6IS14 154 aaKnown RBP17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 MDGA2Q7Z553 956 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 HOGA1Q86XE5 327 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 RAB22AQ9UL26 194 aa17.28■□□□□ 0.36
SNAPC3-206ENST00000490969 NDUFS6O75380 124 aaKnown RBP17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 CLN5O75503 358 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 ADAP1O75689 374 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 IGHV2-5P01817 119 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 PMP2P02689 132 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 CD1CP29017 333 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 DVL1P1P54792 670 aaPredicted RBP17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 CSNK1A1LQ8N752 337 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 RSC1A1Q92681 617 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 FAM46BQ96A09 425 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 ZNF285Q96NJ3 590 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 PDE7BQ9NP56 450 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 STARD5Q9NSY2 213 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 KPTNQ9Y664 436 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 PLGP00747 810 aaPredicted RBP17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 PRF1P14222 555 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 TGIF1Q15583 401 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 CD226Q15762 336 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 TMEM128Q5BJH2 165 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 KCTD18Q6PI47 426 aaPredicted RBP17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 C8orf44Q96CB5 159 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 INTS12Q96CB8 462 aaKnown RBP17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 OR5B2Q96R09 309 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 MRPL22Q9NWU5 206 aaKnown RBP17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 CA14Q9ULX7 337 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 HHLA2Q9UM44 414 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 RHBDD3Q9Y3P4 386 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 SLCO1B1Q9Y6L6 691 aa17.27■□□□□ 0.36
SNAPC3-206ENST00000490969 PMS2P1A4D2B8 440 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 A6NLC8 198 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 XKRYO14609 159 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 OR6A2O95222 327 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 FBP1P09467 338 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 OR8U8P0C7N1 319 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 EIF5AP63241 154 aaKnown RBP17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 SQSTM1Q13501 440 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 RPL7L1Q6DKI1 246 aaKnown RBP17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 LYPD6Q86Y78 171 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 CCL4L1Q8NHW4 92 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 BMFQ96LC9 184 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 TAF9BQ9HBM6 251 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 RAB18Q9NP72 206 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 MMP17Q9ULZ9 603 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms