RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CAPN7Q9Y6W3 813 aa11.05□□□□□ -0.64
EXOSC3-207ENST00000490516 TRBV23-1A0A0A0MS06 115 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 TCRBV4S1A1TA0A5B7 111 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 RBMY1BA6NDE4 496 aaKnown RBP11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 RBMY1EA6NEQ0 496 aaKnown RBP11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 SYNGR1O43759 233 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 CLIC3O95833 236 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 RBMY1DP0C7P1 496 aaKnown RBP11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 BMP2P12643 396 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 NPTX1Q15818 432 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 AANATQ16613 207 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 ENTPD8Q5MY95 495 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 NCR3LG1Q68D85 454 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 ZNF826PQ6ZT77 177 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 TSPYL5Q86VY4 417 aaPredicted RBP11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 FAM216BQ8N7L0 139 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 RCHY1Q96PM5 261 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 RBP7Q96R05 134 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 SPATA5L1Q9BVQ7 753 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 PRSS22Q9GZN4 317 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 C1orf123Q9NWV4 160 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 SLC13A4Q9UKG4 626 aa11.04□□□□□ -0.64
EXOSC3-207ENST00000490516 OR6C6A6NF89 314 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 SERPINE1P05121 402 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 FAM153BP0C7A2 387 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 NR2C1P13056 603 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 FUT1P19526 365 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 LAPTM4AQ15012 233 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 CNN3Q15417 329 aaKnown RBP11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 REEP3Q6NUK4 255 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 TMEM219Q86XT9 240 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 KRT73Q86Y46 540 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 MRPL41Q8IXM3 137 aaKnown RBP11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 GCSAMQ8N6F7 178 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 EPS8L3Q8TE67 593 aaKnown RBP11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 MYDGFQ969H8 173 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 APOBEC3DQ96AK3 386 aaPredicted RBP11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 PRR25Q96S07 402 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 ZBTB18Q99592 522 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 ALG12Q9BV10 488 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 TXNIPQ9H3M7 391 aa11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 TSSC4Q9Y5U2 329 aaPredicted RBP11.03□□□□□ -0.64
EXOSC3-207ENST00000490516 J3QW42 95 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 CLIC1O00299 241 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 SPAG7O75391 227 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 AQP1P29972 269 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 VDAC2P45880 294 aaPredicted RBP11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 RAB13P51153 203 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 CKAP4Q07065 602 aaKnown RBP11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 IKZF1Q13422 519 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 OR8G1Q15617 311 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 WDR38Q5JTN6 314 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 C6orf10Q5SRN2 563 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 TEX36Q5VZQ5 186 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 OGFOD2Q6N063 350 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 RBM45Q8IUH3 476 aaKnown RBP11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 OR6T1Q8NGN1 323 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 OR1F12Q8NHA8 337 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 PFN4Q8NHR9 129 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 ADAMTS16Q8TE57 1224 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 H1FXQ92522 213 aaKnown RBP11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 DMRTB1Q96MA1 342 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 ZNF426Q9BUY5 554 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 HCAR1Q9BXC0 346 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 TXLNGYQ9BZA5 131 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 PYCARDQ9ULZ3 195 aa11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 PRPF19Q9UMS4 504 aaKnown RBP11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 SF3B6Q9Y3B4 125 aaKnown RBP11.02□□□□□ -0.65
EXOSC3-207ENST00000490516 PRORSD1PA6NEY8 169 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 OR7A10O76100 309 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 LHBP01229 141 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 IL6P05231 212 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 SELLP14151 372 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 CA6P23280 308 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 BLCAPP62952 87 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 CDK6Q00534 326 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 FADDQ13158 208 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 PLA1AQ53H76 456 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 CCDC92Q53HC0 331 aaPredicted RBP11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 UNQ9370/PRO34162Q6UXP9 181 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 ETV3LQ6ZN32 361 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 ARMC8Q8IUR7 673 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 SMYD1Q8NB12 490 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 TCP10LQ8TDR4 215 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 ITCHQ96J02 903 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 WACQ9BTA9 647 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 C20orf27Q9GZN8 174 aa11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 METTL8Q9H825 291 aaKnown RBP11.01□□□□□ -0.65
EXOSC3-207ENST00000490516 hCG_1807616A0A1W2PRN6 198 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 NPIPB13A6NJU9 1138 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 NPIPB4C9JG80 1138 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 H7C1C5 153 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 ACOT8O14734 319 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 NDUFB3O43676 98 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 SLC22A3O75751 556 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 PTBP3O95758 552 aaKnown RBP11□□□□□ -0.65
EXOSC3-207ENST00000490516 GRPP07492 148 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 BPGMP07738 259 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 TSPAN19P0C672 248 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 RPL27P61353 136 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms