RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 ZNF69Q9UC07 566 aa9.44□□□□□ -0.9
DUBR-204ENST00000490441 MAGEL2Q9UJ55 1249 aa9.44□□□□□ -0.9
DUBR-204ENST00000490441 TMCC3Q9ULS5 477 aa9.44□□□□□ -0.9
DUBR-204ENST00000490441 B9D1Q9UPM9 204 aa9.44□□□□□ -0.9
DUBR-204ENST00000490441 IGHV3-64DA0A0J9YX35 117 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 DNAJC9-AS1A6NH13 148 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 F5H5P2 479 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 H0YL77 283 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 ARPC3O15145 178 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 IDH3BO43837 385 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 LCATP04180 440 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 WNT2P09544 360 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 HKR1P10072 659 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 HIST1H1CP16403 213 aaKnown RBP9.43□□□□□ -0.9
DUBR-204ENST00000490441 PRTN3P24158 256 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 MTNR1AP48039 350 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 RAD23AP54725 363 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 ZNF181Q2M3W8 571 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 SLC18B1Q6NT16 456 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 MRPL21Q7Z2W9 205 aaKnown RBP9.43□□□□□ -0.9
DUBR-204ENST00000490441 KLBQ86Z14 1044 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 SLC26A10Q8NG04 563 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 OR52L1Q8NGH7 329 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 OR11L1Q8NGX0 322 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 SPRYD4Q8WW59 207 aaPredicted RBP9.43□□□□□ -0.9
DUBR-204ENST00000490441 NEIL1Q96FI4 390 aaPredicted RBP9.43□□□□□ -0.9
DUBR-204ENST00000490441 NSMCE2Q96MF7 247 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 DUX5Q96PT3 197 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 FUZQ9BT04 418 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 C1QTNF5Q9BXJ0 243 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 FAM107BQ9H098 131 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 NSRP1Q9H0G5 558 aaKnown RBP9.43□□□□□ -0.9
DUBR-204ENST00000490441 MYLK2Q9H1R3 596 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 TMEM165Q9HC07 324 aa9.43□□□□□ -0.9
DUBR-204ENST00000490441 NOP16Q9Y3C1 178 aaKnown RBP9.43□□□□□ -0.9
DUBR-204ENST00000490441 IGHV2-70DA0A0C4DH43 119 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 MLNRO43193 412 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 HLA-DPB1P04440 258 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 FABP3P05413 133 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 ACSM4P0C7M7 580 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 PPIAL4GP0DN37 164 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 ZNF823P16415 610 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 EGR1P18146 543 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 PITPNBP48739 271 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 TPTEP56180 551 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 PAX8Q06710 450 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 TRAP1Q12931 704 aaKnown RBP9.42□□□□□ -0.9
DUBR-204ENST00000490441 GK2Q14410 553 aaPredicted RBP9.42□□□□□ -0.9
DUBR-204ENST00000490441 KLF17Q5JT82 389 aaPredicted RBP9.42□□□□□ -0.9
DUBR-204ENST00000490441 SAMD4BQ5PRF9 694 aaKnown RBP9.42□□□□□ -0.9
DUBR-204ENST00000490441 CFAP77Q6ZQR2 320 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 COLCA1Q6ZS62 124 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 PGAP1Q75T13 922 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 ZBTB46Q86UZ6 589 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 BCL6BQ8N143 479 aaPredicted RBP9.42□□□□□ -0.9
DUBR-204ENST00000490441 PARP8Q8N3A8 854 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 CELF2-AS1Q8N7Q2 184 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 SDR9C7Q8NEX9 313 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 RAB40AQ8WXH6 277 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 SPTSSAQ969W0 71 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 ERGIC1Q969X5 290 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 SLC25A28Q96A46 364 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 TMEM246Q9BRR3 403 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 FN3KQ9H479 309 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 CLN8Q9UBY8 286 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 KCNG2Q9UJ96 466 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 PCDHGB1Q9Y5G3 927 aa9.42□□□□□ -0.9
DUBR-204ENST00000490441 IGHV3OR16-10A0A075B7F0 116 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 TRAV40A0A0B4J280 105 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 M0R135 149 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 FSTL3O95633 263 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 HSD17B1P14061 328 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 RRM2P31350 389 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 CD80P33681 288 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 GGT2P36268 569 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 GATA4P43694 442 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.41□□□□□ -0.9
DUBR-204ENST00000490441 OR8G1Q15617 311 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 KCNJ8Q15842 424 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 KRTAP27-1Q3LI81 207 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 ZNF404Q494X3 552 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 CLEC12AQ5QGZ9 265 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 FAM201AQ5SY85 155 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 SLC35F1Q5T1Q4 408 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 RPL13AP3Q6NVV1 102 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 SHISA2Q6UWI4 295 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 ZNF620Q6ZNG0 422 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 DCDC5Q6ZRR9 648 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 PGAM4Q8N0Y7 254 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 PROKR2Q8NFJ6 384 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 OR4C15Q8NGM1 316 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 GNPDA2Q8TDQ7 276 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 SLCO4A1Q96BD0 722 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 ZNF799Q96GE5 643 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 ZNF747Q9BV97 191 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 SLC22A4Q9H015 551 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 UFSP2Q9NUQ7 469 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 KIF17Q9P2E2 1029 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 CYB5R1Q9UHQ9 305 aa9.41□□□□□ -0.9
DUBR-204ENST00000490441 OR6C68A6NDL8 312 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms