RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 COX5BP10606 129 aa18.88■□□□□ 0.61
SMC4-221ENST00000489573 RAB1AP62820 205 aa18.88■□□□□ 0.61
SMC4-221ENST00000489573 PMPCAQ10713 525 aa18.88■□□□□ 0.61
SMC4-221ENST00000489573 HNRNPA0Q13151 305 aaKnown RBP18.88■□□□□ 0.61
SMC4-221ENST00000489573 GABRA6Q16445 453 aa18.88■□□□□ 0.61
SMC4-221ENST00000489573 ZNF404Q494X3 552 aa18.88■□□□□ 0.61
SMC4-221ENST00000489573 SFRP5Q5T4F7 317 aa18.88■□□□□ 0.61
SMC4-221ENST00000489573 TPRA1Q86W33 373 aa18.88■□□□□ 0.61
SMC4-221ENST00000489573 CCDC36Q8IYA8 594 aa18.88■□□□□ 0.61
SMC4-221ENST00000489573 MCFD2Q8NI22 146 aa18.88■□□□□ 0.61
SMC4-221ENST00000489573 PGAM5Q96HS1 289 aa18.88■□□□□ 0.61
SMC4-221ENST00000489573 ATMQ13315 3056 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 RAF1P04049 648 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 P2RY6Q15077 328 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 LUZP2Q86TE4 346 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 NAA40Q86UY6 237 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 CPEB3Q8NE35 698 aaKnown RBP18.87■□□□□ 0.61
SMC4-221ENST00000489573 TMEM106AQ96A25 262 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 BOD1Q96IK1 185 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 KCNS3Q9BQ31 491 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 BARHL1Q9BZE3 327 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 B3GNT2Q9NY97 397 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 A3GALT2U3KPV4 340 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 PIEZO2Q9H5I5 2752 aa18.87■□□□□ 0.61
SMC4-221ENST00000489573 A0A1B0GVI7 797 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 SMIM30A4D0T7 59 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 HOXB1P14653 301 aaPredicted RBP18.86■□□□□ 0.61
SMC4-221ENST00000489573 OPRM1P35372 400 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 UBE2NP61088 152 aaKnown RBP18.86■□□□□ 0.61
SMC4-221ENST00000489573 PLP2Q04941 152 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 GSG1Q2KHT4 349 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 CXorf67Q86X51 503 aaPredicted RBP18.86■□□□□ 0.61
SMC4-221ENST00000489573 OR13C3Q8NGS6 347 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 TBC1D15Q8TC07 691 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 ASB5Q8WWX0 329 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 WBP1Q96G27 269 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 NXF2Q9GZY0 626 aaKnown RBP18.86■□□□□ 0.61
SMC4-221ENST00000489573 ZNF319Q9P2F9 582 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 BOD1L1Q8NFC6 3051 aa18.86■□□□□ 0.61
SMC4-221ENST00000489573 A0A0G2JNJ9 132 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 SYT7O43581 403 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 CD2P06729 351 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 ANOS1P23352 680 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 CASP6P55212 293 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 HGFACQ04756 655 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 MDP1Q86V88 176 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 OR51E1Q8TCB6 317 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 ORAI1Q96D31 301 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 MMP27Q9H306 513 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 PIGMQ9H3S5 423 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 SP140LQ9H930 580 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 Q9UFV3 132 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 A0A1B0GTI1 187 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 IQCMA0A1B0GVH7 501 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 TBX1O43435 398 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 NCR1O76036 304 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 SRMP19623 302 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 APEX1P27695 318 aaKnown RBP18.85■□□□□ 0.61
SMC4-221ENST00000489573 HOXC12P31275 282 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 TSC22D1Q15714 1073 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 COMMD2Q86X83 199 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 OR52H1Q8NGJ2 320 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 SLITRK2Q9H156 845 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 OR10A2Q9H208 303 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 TCF7L1Q9HCS4 588 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 GPR84Q9NQS5 396 aa18.85■□□□□ 0.61
SMC4-221ENST00000489573 TLN1Q9Y490 2541 aaKnown RBP18.84■□□□□ 0.61
SMC4-221ENST00000489573 BSNQ9UPA5 3926 aa18.84■□□□□ 0.61
SMC4-221ENST00000489573 TRGV8A0A0C4DH27 118 aa18.84■□□□□ 0.61
SMC4-221ENST00000489573 A0A0U1RQV5 110 aa18.84■□□□□ 0.61
SMC4-221ENST00000489573 E9PLN8 166 aa18.84■□□□□ 0.61
SMC4-221ENST00000489573 RAB3BP20337 219 aa18.84■□□□□ 0.61
SMC4-221ENST00000489573 CCL1P22362 96 aa18.84■□□□□ 0.61
SMC4-221ENST00000489573 CAV3P56539 151 aa18.84■□□□□ 0.61
SMC4-221ENST00000489573 C17orf78Q8N4C9 275 aa18.84■□□□□ 0.61
SMC4-221ENST00000489573 VKORC1Q9BQB6 163 aa18.84■□□□□ 0.61
SMC4-221ENST00000489573 ZFYVE26Q68DK2 2539 aa18.84■□□□□ 0.61
SMC4-221ENST00000489573 SPENQ96T58 3664 aaKnown RBP18.83■□□□□ 0.61
SMC4-221ENST00000489573 A0A075B6Q4 140 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 C5orf63A6NC05 138 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 PDCD5O14737 125 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 MSTNO14793 375 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 IGLV3-1P01715 115 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 LCATP04180 440 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 STOMP27105 288 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 GFOD2Q3B7J2 385 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 SNAI3Q3KNW1 292 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 TMEM211Q6ICI0 200 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 ZNF474Q6S9Z5 364 aaPredicted RBP18.83■□□□□ 0.6
SMC4-221ENST00000489573 DOK3Q7L591 496 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 BHLHA15Q7RTS1 189 aaPredicted RBP18.83■□□□□ 0.6
SMC4-221ENST00000489573 NR2C2APQ86WQ0 139 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 ZNF584Q8IVC4 421 aa18.83■□□□□ 0.6
SMC4-221ENST00000489573 C6orf62Q9GZU0 229 aaPredicted RBP18.83■□□□□ 0.6
SMC4-221ENST00000489573 ZNF629Q9UEG4 869 aaPredicted RBP18.83■□□□□ 0.6
SMC4-221ENST00000489573 PLEKHB1Q9UF11 243 aaPredicted RBP18.83■□□□□ 0.6
SMC4-221ENST00000489573 LOC100509620A0A075B734 347 aa18.82■□□□□ 0.6
SMC4-221ENST00000489573 BMP5P22003 454 aa18.82■□□□□ 0.6
SMC4-221ENST00000489573 LINC00299Q6ZSB3 139 aa18.82■□□□□ 0.6
SMC4-221ENST00000489573 NCCRP1Q6ZVX7 275 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms