RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 ZNF582Q96NG8 517 aaPredicted RBP11.38□□□□□ -0.59
CCL28-202ENST00000489442 NARFLQ9H6Q4 476 aa11.38□□□□□ -0.59
CCL28-202ENST00000489442 SLC25A19Q9HC21 320 aa11.38□□□□□ -0.59
CCL28-202ENST00000489442 ENOPH1Q9UHY7 261 aa11.38□□□□□ -0.59
CCL28-202ENST00000489442 CLDN25C9JDP6 229 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 ZNF878C9JN71 531 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 PRODHO43272 600 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 LILRA1O75019 489 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 ADH4P08319 380 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 HOXB4P17483 251 aaPredicted RBP11.37□□□□□ -0.59
CCL28-202ENST00000489442 TNFRSF1AP19438 455 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 HSD11B1P28845 292 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 GRB2P62993 217 aaKnown RBP11.37□□□□□ -0.59
CCL28-202ENST00000489442 CDK5R2Q13319 367 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 KPNB1Q14974 876 aaKnown RBP11.37□□□□□ -0.59
CCL28-202ENST00000489442 PCK2Q16822 640 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 KRTAP27-1Q3LI81 207 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 DRAM2Q6UX65 266 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 COLCA1Q6ZS62 124 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 CXXC5Q7LFL8 322 aaKnown RBP11.37□□□□□ -0.59
CCL28-202ENST00000489442 MRPL21Q7Z2W9 205 aaKnown RBP11.37□□□□□ -0.59
CCL28-202ENST00000489442 ZNF283Q8N7M2 679 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 BHLHE23Q8NDY6 225 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 OR10S1Q8NGN2 331 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 HPS1Q92902 700 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 TIMD4Q96H15 378 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 POM121Q96HA1 1249 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 KCNJ15Q99712 375 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 DDX28Q9NUL7 540 aaKnown RBP11.37□□□□□ -0.59
CCL28-202ENST00000489442 TREM2Q9NZC2 230 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 WNK2Q9Y3S1 2297 aa11.37□□□□□ -0.59
CCL28-202ENST00000489442 MITFO75030 526 aaPredicted RBP11.36□□□□□ -0.59
CCL28-202ENST00000489442 RP2O75695 350 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 TGFAP01135 160 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 APOC1P02654 83 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 PSKH1P11801 424 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 ZNF16P17020 682 aaPredicted RBP11.36□□□□□ -0.59
CCL28-202ENST00000489442 IGFBP5P24593 272 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 ACTR3P61158 418 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 MVKQ03426 396 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 SLC3A1Q07837 685 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 GK2Q14410 553 aaPredicted RBP11.36□□□□□ -0.59
CCL28-202ENST00000489442 SLC35D3Q5M8T2 416 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 KDM4DQ6B0I6 523 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 FAM166AQ6J272 317 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 ZFP1Q6P2D0 407 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 PGAP1Q75T13 922 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 PEG10Q86TG7 708 aaKnown RBP11.36□□□□□ -0.59
CCL28-202ENST00000489442 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.36□□□□□ -0.59
CCL28-202ENST00000489442 OR8G5Q8NG78 346 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 OR13G1Q8NGZ3 307 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 ST7LQ8TDW4 575 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 THEM6Q8WUY1 208 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 SPRYD4Q8WW59 207 aaPredicted RBP11.36□□□□□ -0.59
CCL28-202ENST00000489442 RAB1CQ92928 201 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 MSI2Q96DH6 328 aaKnown RBP11.36□□□□□ -0.59
CCL28-202ENST00000489442 RAB3IPQ96QF0 476 aaPredicted RBP11.36□□□□□ -0.59
CCL28-202ENST00000489442 ABHD6Q9BV23 337 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 SP140LQ9H930 580 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 H2AFY2Q9P0M6 372 aaPredicted RBP11.36□□□□□ -0.59
CCL28-202ENST00000489442 OAZ3Q9UMX2 235 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 TANC2Q9HCD6 1990 aa11.36□□□□□ -0.59
CCL28-202ENST00000489442 SAC3D1A6NKF1 404 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 TBX1O43435 398 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 LMX1BO60663 402 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 ANXA2P07355 339 aaKnown RBP11.35□□□□□ -0.59
CCL28-202ENST00000489442 LYNP07948 512 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 CD55P08174 381 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 H2BFMP0C1H6 154 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 NAA10P41227 235 aaPredicted RBP11.35□□□□□ -0.59
CCL28-202ENST00000489442 APOFQ13790 326 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 AVPI1Q5T686 147 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 LCN1P1Q5VSP4 162 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 Q6ZR03 302 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 TIGD4Q8IY51 512 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 BBS1Q8NFJ9 593 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 CLDND2Q8NHS1 167 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 GABARAPL1Q9H0R8 117 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 TOR3AQ9H497 397 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 MARCH7Q9H992 704 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 TMEM100Q9NV29 134 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 IL19Q9UHD0 177 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 KCNS2Q9ULS6 477 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 CACNG2Q9Y698 323 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 ISPDA4D126 451 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 GGT3PA6NGU5 568 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 IQCF6A8MYZ5 107 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 SELENOFO60613 162 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 CRLF1O75462 422 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 SLC2A1P11166 492 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 IL2RGP31785 369 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 OTX1P32242 354 aaPredicted RBP11.35□□□□□ -0.59
CCL28-202ENST00000489442 CX3CR1P49238 355 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 RAD23AP54725 363 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 PRSS12P56730 875 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 SNAI3Q3KNW1 292 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 TCEANCQ8N8B7 351 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 ZNF454Q8N9F8 522 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 LINC01356Q8N9X3 169 aa11.35□□□□□ -0.59
CCL28-202ENST00000489442 OR10AD1Q8NGE0 317 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms