RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 EMC6Q9BV81 110 aa6.99□□□□□ -1.29
TRAPPC12-221ENST00000489032 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
TRAPPC12-221ENST00000489032 ULBP2Q9BZM5 246 aa6.99□□□□□ -1.29
TRAPPC12-221ENST00000489032 TXNIPQ9H3M7 391 aa6.99□□□□□ -1.29
TRAPPC12-221ENST00000489032 NRIP3Q9NQ35 241 aa6.99□□□□□ -1.29
TRAPPC12-221ENST00000489032 SLC7A10Q9NS82 523 aa6.99□□□□□ -1.29
TRAPPC12-221ENST00000489032 UBAP1Q9NZ09 502 aa6.99□□□□□ -1.29
TRAPPC12-221ENST00000489032 ENOPH1Q9UHY7 261 aa6.99□□□□□ -1.29
TRAPPC12-221ENST00000489032 MGAT4BQ9UQ53 548 aa6.99□□□□□ -1.29
TRAPPC12-221ENST00000489032 POFUT2Q9Y2G5 429 aa6.99□□□□□ -1.29
TRAPPC12-221ENST00000489032 ARRDC5A6NEK1 342 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 INAFM1C9JVW0 142 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 M0R3G1 203 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 DLGAP1O14490 977 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 CDC42EP2O14613 210 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 RBMXL2O75526 392 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 UPK3AO75631 287 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 RAD51DO75771 328 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZNF432O94892 652 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 GOSR1O95249 250 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 SNAP29O95721 258 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 CLPTM1O96005 669 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 TSPAN19P0C672 248 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 ANXA8P13928 327 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 IGHV1-2P23083 117 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 PAX7P23759 505 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 IGFBP5P24593 272 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 ACVR1BP36896 505 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 GUCA1AP43080 201 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 RPL5P46777 297 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 UBE2NP61088 152 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 RPL27P61353 136 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 RPS4XP62701 263 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 ADARB1P78563 741 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 MYBPC1Q00872 1141 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 ROR2Q01974 943 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 SRSF4Q08170 494 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 COX10Q12887 443 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 PPP1R8Q12972 351 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 SNTB1Q13884 538 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 ACKR1Q16570 336 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 DEFB113Q30KQ7 82 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 TIMM23BQ5SRD1 257 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 C1QTNF12Q5T7M4 302 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 C9orf135Q5VTT2 229 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 GPR139Q6DWJ6 353 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZNF66Q6ZN08 573 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 DPY19L2P2Q6ZN68 376 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 IGFN1Q86VF2 1251 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 C20orf196Q8IYI0 205 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 C8orf59Q8N0T1 100 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 TMEM123Q8N131 208 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 C17orf78Q8N4C9 275 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZNF433Q8N7K0 673 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 SETD9Q8NE22 299 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 TSPAN14Q8NG11 270 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 OR9Q2Q8NGE9 314 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 DPF1Q92782 380 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 S100PBPQ96BU1 408 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZC3HAV1LQ96H79 300 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 ALKBH3Q96Q83 286 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 RBP7Q96R05 134 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 KATNB1Q9BVA0 655 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 CRLF2Q9HC73 371 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 GLTPQ9NZD2 209 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 PDP1Q9P0J1 537 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 SIGLEC7Q9Y286 467 aa6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 MAGED1Q9Y5V3 778 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC12-221ENST00000489032 HIVEP2P31629 2446 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 A0A087WXM4 84 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 SMIM31A0A1B0GVY4 71 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 SLC22A23A1A5C7 686 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 OR5H1A6NKK0 313 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZNF99A8MXY4 864 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 RPL36A-HNRNPH2H7BZ11 118 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 ARHGEF9O43307 516 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 AHCYL1O43865 530 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 PTP4A3O75365 173 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 TRMUO75648 421 aaKnown RBP6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 IGHMP01871 453 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 RAF1P04049 648 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 CSF1P09603 554 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 EDNRAP25101 427 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 SOX2P48431 317 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 GSSP48637 474 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 NR1H2P55055 460 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 ERVK-25P63136 954 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 CD47Q08722 323 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 KEAP1Q14145 624 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 TSC22D1Q15714 1073 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 SRSF7Q16629 238 aaKnown RBP eCLIP6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 CEACAM16Q2WEN9 425 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 ARMC4Q5T2S8 1044 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 SLC18B1Q6NT16 456 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 PAMR1Q6UXH9 720 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 RASSF6Q6ZTQ3 369 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 KLBQ86Z14 1044 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 CCDC36Q8IYA8 594 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZNF786Q8N393 782 aa6.97□□□□□ -1.29
TRAPPC12-221ENST00000489032 ARIH2OSQ8N7S6 290 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms