RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 KDM4DQ6B0I6 523 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 LYPD4Q6UWN0 246 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 COLCA1Q6ZS62 124 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 DPY19L4Q7Z388 723 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 SPRYD4Q8WW59 207 aaPredicted RBP12.84□□□□□ -0.35
CYTH3-209ENST00000488964 PYDC1Q8WXC3 89 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 ZMYND19Q96E35 227 aaPredicted RBP12.84□□□□□ -0.35
CYTH3-209ENST00000488964 SLC22A4Q9H015 551 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 SEMA6AQ9H2E6 1030 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 MSL2Q9HCI7 577 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 KCNS2Q9ULS6 477 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 OAZ3Q9UMX2 235 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 TMEM14AQ9Y6G1 99 aa12.84□□□□□ -0.35
CYTH3-209ENST00000488964 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.84□□□□□ -0.35
CYTH3-209ENST00000488964 SONP18583 2426 aaKnown RBP12.83□□□□□ -0.35
CYTH3-209ENST00000488964 NSD1Q96L73 2696 aaPredicted RBP12.83□□□□□ -0.36
CYTH3-209ENST00000488964 IQCF6A8MYZ5 107 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 LYNX1G3V0Z9 82 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 XRCC2O43543 280 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 ANXA2P07355 339 aaKnown RBP12.83□□□□□ -0.36
CYTH3-209ENST00000488964 LYNP07948 512 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 H2BFMP0C1H6 154 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 IGHV4-31P0DP07 118 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 LYNX1P0DP58 116 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 HNF1AP20823 631 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 CFL1P23528 166 aaKnown RBP12.83□□□□□ -0.36
CYTH3-209ENST00000488964 SRP9P49458 86 aaKnown RBP12.83□□□□□ -0.36
CYTH3-209ENST00000488964 CDK5R2Q13319 367 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 SNCBQ16143 134 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 C6orf52Q5T4I8 152 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 TMEM236Q5W0B7 351 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 OR2T2Q6IF00 324 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 FAM166AQ6J272 317 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 GID4Q8IVV7 300 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 OR5AS1Q8N127 324 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 OR8G5Q8NG78 346 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 CCL17Q92583 94 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 STMN2Q93045 179 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 RAB39BQ96DA2 213 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 POFUT1Q9H488 388 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 MARCH7Q9H992 704 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 TMEM100Q9NV29 134 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 LPAR3Q9UBY5 353 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 IL19Q9UHD0 177 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 LAMP5Q9UJQ1 280 aa12.83□□□□□ -0.36
CYTH3-209ENST00000488964 LOC100289279A0A1B0GTE1 492 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 GGT3PA6NGU5 568 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 SAC3D1A6NKF1 404 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 SLC22A31A6NKX4 558 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 INAFM1C9JVW0 142 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 ANPEPP15144 967 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 ZNF16P17020 682 aaPredicted RBP12.82□□□□□ -0.36
CYTH3-209ENST00000488964 COL8A2P25067 703 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 OTX1P32242 354 aaPredicted RBP12.82□□□□□ -0.36
CYTH3-209ENST00000488964 CX3CR1P49238 355 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 PRKXP51817 358 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 CDH15P55291 814 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 MZT1Q08AG7 82 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 DBPQ10586 325 aaPredicted RBP12.82□□□□□ -0.36
CYTH3-209ENST00000488964 APOFQ13790 326 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 HLXQ14774 488 aaPredicted RBP12.82□□□□□ -0.36
CYTH3-209ENST00000488964 TIGD6Q17RP2 521 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 SLX4IPQ5VYV7 408 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 KCTD18Q6PI47 426 aaPredicted RBP12.82□□□□□ -0.36
CYTH3-209ENST00000488964 TIGD4Q8IY51 512 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 OR52H1Q8NGJ2 320 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 OTOSQ8NHW6 89 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 ST7LQ8TDW4 575 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 THEM6Q8WUY1 208 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 RNF133Q8WVZ7 376 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 ZNRF4Q8WWF5 429 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 GTF3AQ92664 365 aaKnown RBP12.82□□□□□ -0.36
CYTH3-209ENST00000488964 YIPF5Q969M3 257 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 CIB1Q99828 191 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 ABHD6Q9BV23 337 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 YIPF3Q9GZM5 350 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 OR10A2Q9H208 303 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 RIBC2Q9H4K1 309 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 NIPAL2Q9H841 368 aa12.82□□□□□ -0.36
CYTH3-209ENST00000488964 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.81□□□□□ -0.36
CYTH3-209ENST00000488964 ZAR1LA6NP61 321 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 PHYHO14832 338 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 TBX1O43435 398 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 RP2O75695 350 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 NAA10P41227 235 aaPredicted RBP12.81□□□□□ -0.36
CYTH3-209ENST00000488964 CDC42P60953 191 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 GK2Q14410 553 aaPredicted RBP12.81□□□□□ -0.36
CYTH3-209ENST00000488964 SPATC1Q76KD6 591 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 SLC16A9Q7RTY1 509 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 FTMTQ8N4E7 242 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 LINC01356Q8N9X3 169 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 BHLHE23Q8NDY6 225 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 OR10S1Q8NGN2 331 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 ASB17Q8WXJ9 295 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 CNN2Q99439 309 aaKnown RBP12.81□□□□□ -0.36
CYTH3-209ENST00000488964 MNTQ99583 582 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 IMPAD1Q9NX62 359 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 CDC42EP3Q9UKI2 254 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 PPP1R3CQ9UQK1 317 aa12.81□□□□□ -0.36
CYTH3-209ENST00000488964 N6AMT1Q9Y5N5 214 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms