RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TREML4Q6UXN2 200 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 DCDC5Q6ZRR9 648 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 SPATC1Q76KD6 591 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 FITM2Q8N6M3 262 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 FAM86B1Q8N7N1 296 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 CELF2-AS1Q8N7Q2 184 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 NMNAT3Q96T66 252 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 PITX2Q99697 317 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 ATF6BQ99941 703 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 FUZQ9BT04 418 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 OR52D1Q9H346 318 aa15.36■□□□□ 0.05
HDAC6-231ENST00000488905 SAMD4AQ9UPU9 718 aaKnown RBP15.36■□□□□ 0.05
HDAC6-231ENST00000488905 F5H5K5 113 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 CCDC22O60826 627 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 RENP00797 406 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 SLC6A6P31641 620 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 CD200P41217 278 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 RAD23AP54725 363 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 DBPQ10586 325 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-231ENST00000488905 TRAP1Q12931 704 aaKnown RBP15.35■□□□□ 0.05
HDAC6-231ENST00000488905 ECH1Q13011 328 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 KRT72Q14CN4 511 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 WDR25Q64LD2 544 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-231ENST00000488905 C16orf87Q6PH81 154 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 LYPD2Q6UXB3 125 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 BRD3OSQ6XYD6 125 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 OR10S1Q8NGN2 331 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 OR11L1Q8NGX0 322 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 ERGIC1Q969X5 290 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 TMIGD2Q96BF3 282 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 CDADC1Q9BWV3 514 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 SLITRK2Q9H156 845 aa15.35■□□□□ 0.05
HDAC6-231ENST00000488905 SRA1Q9HD15 236 aaKnown RBP15.35■□□□□ 0.05
HDAC6-231ENST00000488905 RPRD1BQ9NQG5 326 aaKnown RBP15.35■□□□□ 0.05
HDAC6-231ENST00000488905 DCAF13Q9NV06 445 aaKnown RBP15.35■□□□□ 0.05
HDAC6-231ENST00000488905 C22orf46C9J442 243 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 ARPC3O15145 178 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 HOXA3O43365 443 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-231ENST00000488905 FAM20BO75063 409 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 HIST1H1CP16403 213 aaKnown RBP15.34■□□□□ 0.05
HDAC6-231ENST00000488905 PSME3P61289 254 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 FGF12P61328 243 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 MALLQ13021 153 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 DEFB112Q30KQ8 113 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 RFX4Q33E94 735 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 SLC36A3Q495N2 470 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 CLEC12AQ5QGZ9 265 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 PRAMEF6Q5VXH4 476 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 GLYATQ6IB77 296 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 ZNF841Q6ZN19 808 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 ZBTB46Q86UZ6 589 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 C19orf18Q8NEA5 215 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 OR4K13Q8NH42 304 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 SPAG4Q9NPE6 437 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 PNRC2Q9NPJ4 139 aaKnown RBP15.34■□□□□ 0.05
HDAC6-231ENST00000488905 CYB5R1Q9UHQ9 305 aa15.34■□□□□ 0.05
HDAC6-231ENST00000488905 NOTCH1P46531 2555 aa15.33■□□□□ 0.05
HDAC6-231ENST00000488905 ENSAO43768 121 aaKnown RBP15.33■□□□□ 0.04
HDAC6-231ENST00000488905 LCATP04180 440 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 GGT2P36268 569 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 PSMB10P40306 273 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 SPIBQ01892 262 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 GPR157Q5UAW9 335 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 PGAP1Q75T13 922 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 SDR9C7Q8NEX9 313 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 OR2AJ1Q8NGZ0 328 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 SLCO4A1Q96BD0 722 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 IFT27Q9BW83 186 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 MMADHCQ9H3L0 296 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-231ENST00000488905 FN3KQ9H479 309 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 PRDM13Q9H4Q3 707 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 UFSP2Q9NUQ7 469 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 TMCC3Q9ULS5 477 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 MMP24Q9Y5R2 645 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 V9GYQ6 96 aa15.33■□□□□ 0.04
HDAC6-231ENST00000488905 SRRM5B3KS81 715 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 M0R135 149 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 GADD45GO95257 159 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 HLA-DQA2P01906 255 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 SEMG1P04279 462 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 OMGP23515 440 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 NOS3P29474 1203 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 NPY4RP50391 375 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 TPTEP56180 551 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 SMIM11AP58511 58 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 HOXA4Q00056 320 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-231ENST00000488905 OR8G1Q15617 311 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 MPPED2Q15777 294 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 MRPL21Q7Z2W9 205 aaKnown RBP15.32■□□□□ 0.04
HDAC6-231ENST00000488905 NAA40Q86UY6 237 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 SPRYD4Q8WW59 207 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-231ENST00000488905 ZDHHC16Q969W1 377 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 ZNF799Q96GE5 643 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 TECTBQ96PL2 329 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 ADAT1Q9BUB4 502 aaKnown RBP15.32■□□□□ 0.04
HDAC6-231ENST00000488905 CTSZQ9UBR2 303 aa15.32■□□□□ 0.04
HDAC6-231ENST00000488905 NOP16Q9Y3C1 178 aaKnown RBP15.32■□□□□ 0.04
HDAC6-231ENST00000488905 OR6C68A6NDL8 312 aa15.31■□□□□ 0.04
HDAC6-231ENST00000488905 FAM181BA6NEQ2 426 aa15.31■□□□□ 0.04
HDAC6-231ENST00000488905 GMNNO75496 209 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms