RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 PRSS54Q6PEW0 395 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 TMEM150AQ86TG1 271 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 FAM228AQ86W67 206 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 SLC22A9Q8IVM8 553 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 STK40Q8N2I9 435 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 PRELID2Q8N945 189 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 CHST4Q8NCG5 386 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 OR1J4Q8NGS1 313 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 CPNE4Q96A23 557 aaPredicted RBP1.73□□□□□ -2.13
PTPN4-212ENST00000488896 TMEM230Q96A57 120 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 GPR82Q96P67 336 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 CHCHD7Q9BUK0 85 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 OR51M1Q9H341 326 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 TMEM27Q9HBJ8 222 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 CSNK1G1Q9HCP0 422 aa1.73□□□□□ -2.13
PTPN4-212ENST00000488896 KLHL41O60662 606 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 TCP1P17987 556 aaKnown RBP1.72□□□□□ -2.13
PTPN4-212ENST00000488896 U2AF2P26368 475 aaKnown RBP eCLIP1.72□□□□□ -2.134e-6■■□□□ 13.2
PTPN4-212ENST00000488896 MPV17P39210 176 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 NAA10P41227 235 aaPredicted RBP1.72□□□□□ -2.13
PTPN4-212ENST00000488896 ACLYP53396 1101 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 DGCR6Q14129 220 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 ZNF266Q14584 549 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 SSX2Q16385 188 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 TBPL2Q6SJ96 375 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 MBOAT1Q6ZNC8 495 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 MRPL55Q7Z7F7 128 aaKnown RBP1.72□□□□□ -2.13
PTPN4-212ENST00000488896 NPWQ8N729 165 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 C11orf72Q8NBR9 251 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 GPR26Q8NDV2 337 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 AKR7LQ8NHP1 331 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 SLC2A14Q8TDB8 520 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 EEF1AKMT3Q96AZ1 226 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 ILKAPQ9H0C8 392 aaPredicted RBP1.72□□□□□ -2.13
PTPN4-212ENST00000488896 RACGAP1Q9H0H5 632 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 LINC00574Q9H8X3 128 aa1.72□□□□□ -2.13
PTPN4-212ENST00000488896 PLPP1O14494 284 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 CHMP2AO43633 222 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 FKBP6O75344 327 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 PTMSP20962 102 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 TALDO1P37837 337 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 GZMMP51124 257 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 PRR3P79522 188 aaKnown RBP1.71□□□□□ -2.14
PTPN4-212ENST00000488896 PPM1LQ5SGD2 360 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 SLC8B1Q6J4K2 584 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 H3F3CQ6NXT2 135 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 OR4M1Q8NGD0 313 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 TMEM159Q96B96 161 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 SAMD10Q9BYL1 202 aa1.71□□□□□ -2.14
PTPN4-212ENST00000488896 TICRRQ7Z2Z1 1910 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 A0A0J9YXV3 536 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 HEATR9A2RTY3 570 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 SMCO2A6NFE2 343 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 C4orf51C9J302 202 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 PRAMEF26H0Y7S4 382 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 H0Y8G0 127 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 IGLV7-43P04211 117 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 CD28P10747 220 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 SULT1E1P49888 294 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 UBE2E1P51965 193 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 CRISP1P54107 249 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 CMC4P56277 68 aaPredicted RBP1.7□□□□□ -2.14
PTPN4-212ENST00000488896 PPIDQ08752 370 aaKnown RBP1.7□□□□□ -2.14
PTPN4-212ENST00000488896 SIGLEC14Q08ET2 396 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 NCF4Q15080 339 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 PPP1R7Q15435 360 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 CHRNA6Q15825 494 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 MRPL23Q16540 153 aaKnown RBP1.7□□□□□ -2.14
PTPN4-212ENST00000488896 PYDC2Q56P42 97 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 XKR7Q5GH72 579 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 DEGS2Q6QHC5 323 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 NUP58Q9BVL2 599 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 ANKRA2Q9H9E1 313 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 HRASLS2Q9NWW9 162 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 HPCAL4Q9UM19 191 aa1.7□□□□□ -2.14
PTPN4-212ENST00000488896 MUC6Q6W4X9 2439 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 AKNAQ7Z591 1439 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 IGHV1-69DA0A0B4J2H0 117 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 K7EMT4 169 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 MPHOSPH10O00566 681 aaKnown RBP1.69□□□□□ -2.14
PTPN4-212ENST00000488896 CLOCKO15516 846 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 SERPINB7O75635 380 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 OR2J3O76001 311 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 RPN2P04844 631 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 ATF6P18850 670 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 FOXN2P32314 431 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 CDH6P55285 790 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 STXBP1P61764 594 aaKnown RBP1.69□□□□□ -2.14
PTPN4-212ENST00000488896 PRAMEF20Q5VT98 475 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 C12orf54Q6X4T0 127 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 CERS6Q6ZMG9 384 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 USP50Q70EL3 339 aaPredicted RBP1.69□□□□□ -2.14
PTPN4-212ENST00000488896 NANOGNBQ7Z5D8 188 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 OR7G2Q8NG99 324 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 OR56B2PQ8NGI1 322 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 OR52E2Q8NGJ4 325 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 ACMSDQ8TDX5 336 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 APH1BQ8WW43 257 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 ELMO1Q92556 727 aa1.69□□□□□ -2.14
PTPN4-212ENST00000488896 PKMYT1Q99640 499 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms