RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 ZNF771Q7L3S4 317 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-209ENST00000487617 PAPD5Q8NDF8 572 aaKnown RBP17.28■□□□□ 0.36
HDAC4-209ENST00000487617 BHLHE23Q8NDY6 225 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 OR10AD1Q8NGE0 317 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 OR2V2Q96R30 315 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 COPS4Q9BT78 406 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 CENPMQ9NSP4 180 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 DDX28Q9NUL7 540 aaKnown RBP17.28■□□□□ 0.36
HDAC4-209ENST00000487617 TMEM106BQ9NUM4 274 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 DCAF16Q9NXF7 216 aa17.28■□□□□ 0.36
HDAC4-209ENST00000487617 IGHV2-5P01817 119 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 OSMP13725 252 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 ANXA8P13928 327 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 SRP14P37108 136 aaKnown RBP17.27■□□□□ 0.36
HDAC4-209ENST00000487617 RASSF2P50749 326 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 PRSS12P56730 875 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 GK2Q14410 553 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-209ENST00000487617 GINS1Q14691 196 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 TAF13Q15543 124 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 PCK2Q16822 640 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 ZNF283Q8N7M2 679 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 SLCO4A1Q96BD0 722 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 SLC30A2Q9BRI3 323 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 UBAP1Q9NZ09 502 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 PPP1R3CQ9UQK1 317 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 NPTNQ9Y639 398 aa17.27■□□□□ 0.36
HDAC4-209ENST00000487617 TRAV20A0A0B4J274 112 aa17.26■□□□□ 0.35
HDAC4-209ENST00000487617 DEAF1O75398 565 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-209ENST00000487617 SBK2P0C263 348 aa17.26■□□□□ 0.35
HDAC4-209ENST00000487617 PAICSP22234 425 aaKnown RBP17.26■□□□□ 0.35
HDAC4-209ENST00000487617 RBMXP38159 391 aaKnown RBP17.26■□□□□ 0.35
HDAC4-209ENST00000487617 TEX30Q5JUR7 227 aa17.26■□□□□ 0.35
HDAC4-209ENST00000487617 LINC01590Q5TEZ4 76 aa17.26■□□□□ 0.35
HDAC4-209ENST00000487617 PGAP1Q75T13 922 aa17.26■□□□□ 0.35
HDAC4-209ENST00000487617 MRPL21Q7Z2W9 205 aaKnown RBP17.26■□□□□ 0.35
HDAC4-209ENST00000487617 SLAMF6Q96DU3 332 aa17.26■□□□□ 0.35
HDAC4-209ENST00000487617 TMEM100Q9NV29 134 aa17.26■□□□□ 0.35
HDAC4-209ENST00000487617 H0YL77 283 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 TIPRLO75663 272 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 ATP5HO75947 161 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 GSTT1P30711 240 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 SRP9P49458 86 aaKnown RBP17.25■□□□□ 0.35
HDAC4-209ENST00000487617 PRKXP51817 358 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 EIF2B1Q14232 305 aaKnown RBP17.25■□□□□ 0.35
HDAC4-209ENST00000487617 SNAI3Q3KNW1 292 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 DRAM2Q6UX65 266 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 SPATC1Q76KD6 591 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 ERI1Q8IV48 349 aaKnown RBP17.25■□□□□ 0.35
HDAC4-209ENST00000487617 OR6N2Q8NGY6 317 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 MEGF10Q96KG7 1140 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 INTS14Q96SY0 518 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 KCNJ15Q99712 375 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 OR51V1Q9H2C8 321 aa17.25■□□□□ 0.35
HDAC4-209ENST00000487617 RNF212BA8MTL3 300 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 ZNF878C9JN71 531 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 PRR23D1E9PI22 279 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-209ENST00000487617 PHF1O43189 567 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-209ENST00000487617 PLPP2O43688 288 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 GLCEO94923 617 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 IGHV2-70P01814 119 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 HMGN1P05114 100 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 PRR23D2P0DMB1 279 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-209ENST00000487617 OTX1P32242 354 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-209ENST00000487617 THBS2P35442 1172 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 PLBD1Q6P4A8 553 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 SHQ1Q6PI26 577 aaKnown RBP17.24■□□□□ 0.35
HDAC4-209ENST00000487617 CXXC5Q7LFL8 322 aaKnown RBP17.24■□□□□ 0.35
HDAC4-209ENST00000487617 ST7LQ8TDW4 575 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 SPRYD4Q8WW59 207 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-209ENST00000487617 NTN4Q9HB63 628 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 GCM1Q9NP62 436 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 KIF17Q9P2E2 1029 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 PCDHB10Q9UN67 800 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 N6AMT1Q9Y5N5 214 aa17.24■□□□□ 0.35
HDAC4-209ENST00000487617 ATRQ13535 2644 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 IGHV3-64DA0A0J9YX35 117 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 F5H5P2 479 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 MLNRO43193 412 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 HLA-DPB1P04440 258 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 SLC2A1P11166 492 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 MMP16P51512 607 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 CDK5Q00535 292 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 ZNF92Q03936 586 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 FAHD2BQ6P2I3 314 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-209ENST00000487617 DPY19L4Q7Z388 723 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 NRBF2Q96F24 287 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 FAHD2AQ96GK7 314 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 TEX12Q9BXU0 123 aa17.23■□□□□ 0.35
HDAC4-209ENST00000487617 C5orf63A6NC05 138 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 TMEM178BH3BS89 294 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 IFNL4K9M1U5 179 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 ANOS1P23352 680 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 SLC15A1P46059 708 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 BTG1P62324 171 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 GRB2P62993 217 aaKnown RBP17.22■□□□□ 0.35
HDAC4-209ENST00000487617 GLYATL3Q5SZD4 288 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 TMEM236Q5W0B7 351 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 SHFQ7M4L6 423 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 SPICQ8N5J4 248 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 OR2AE1Q8NHA4 323 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms