RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PCK2Q16822 640 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 ESCO2Q56NI9 601 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 SLC51BQ86UW2 128 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 ZSCAN4Q8NAM6 433 aaPredicted RBP10.58□□□□□ -0.72
TRA2B-214ENST00000487615 FLVCR1-AS1Q8TAF5 88 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 KCNE4Q8WWG9 221 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 INTS12Q96CB8 462 aaKnown RBP10.58□□□□□ -0.72
TRA2B-214ENST00000487615 RASL10BQ96S79 203 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 KCNJ15Q99712 375 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 NKX3-1Q99801 234 aaPredicted RBP10.58□□□□□ -0.72
TRA2B-214ENST00000487615 FSCN3Q9NQT6 498 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 TRAPPC2LH3BP13 241 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 CTAG2O75638 210 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 TGM6O95932 706 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 ITGB2P05107 769 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 NPY4RP50391 375 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 ZNF133P52736 654 aaPredicted RBP10.58□□□□□ -0.72
TRA2B-214ENST00000487615 SHBQ15464 509 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 MLXQ9UH92 298 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 NUP50Q9UKX7 468 aa10.58□□□□□ -0.72
TRA2B-214ENST00000487615 COL4A6Q14031 1691 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 PYCARD-AS1I3L0S3 204 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 GSTZ1O43708 216 aaPredicted RBP10.57□□□□□ -0.72
TRA2B-214ENST00000487615 CRYZL1O95825 349 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 IGHV3-9P01782 118 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 IL5P05113 134 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 CD1AP06126 327 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 ZMYND11Q15326 602 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 ELFN2Q5R3F8 820 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 GLDNQ6ZMI3 551 aaPredicted RBP10.57□□□□□ -0.72
TRA2B-214ENST00000487615 CMTM1Q8IZ96 169 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 PGLYRP3Q96LB9 341 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 SPIN2AQ99865 258 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 SPIN2BQ9BPZ2 258 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 ASF1BQ9NVP2 202 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.57□□□□□ -0.72
TRA2B-214ENST00000487615 TNFSF11O14788 317 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 TSPAN2O60636 221 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 NANOS3P60323 173 aaKnown RBP10.57□□□□□ -0.72
TRA2B-214ENST00000487615 ST3GAL2Q16842 350 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 GSG1Q2KHT4 349 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 SLC25A45Q8N413 288 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 CCDC54Q8NEL0 328 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 LIPHQ8WWY8 451 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 ASB10Q8WXI3 467 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 VOPP1Q96AW1 172 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 KLRC4-KLRK1H3BQV0 150 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 TBPP20226 339 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 PRSS35Q8N3Z0 413 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 ARL11Q969Q4 196 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 GPR173Q9NS66 373 aa10.57□□□□□ -0.72
TRA2B-214ENST00000487615 IGHV5-10-1A0A0J9YXX1 117 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 hCG_1807616A0A1W2PRN6 198 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 LIPT2A6NK58 231 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 FAM166BA8MTA8 275 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 TO15178 435 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 TPD52L2O43399 206 aaKnown RBP10.56□□□□□ -0.72
TRA2B-214ENST00000487615 TXNDC12O95881 172 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 S100A9P06702 114 aaKnown RBP10.56□□□□□ -0.72
TRA2B-214ENST00000487615 OR4E1P0C645 316 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 GNB3P16520 340 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 FOXL2P58012 376 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 MEX3BQ6ZN04 569 aaKnown RBP10.56□□□□□ -0.72
TRA2B-214ENST00000487615 OR10K1Q8NGX5 313 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 OR10R2Q8NGX6 335 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 OR10AC1Q8NH08 325 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 SNIP1Q8TAD8 396 aaKnown RBP10.56□□□□□ -0.72
TRA2B-214ENST00000487615 ZPBPQ9BS86 351 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 CCDC86Q9H6F5 360 aaKnown RBP10.56□□□□□ -0.72
TRA2B-214ENST00000487615 OCIAD1Q9NX40 245 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 WASF3Q9UPY6 502 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 TIMM10BQ9Y5J6 103 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 TMEM272A0A1B0GTI8 110 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 SELENOVP59797 346 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 MDGA2Q7Z553 956 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 TMEM229BQ8NBD8 167 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 ZNF680Q8NEM1 530 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 TMEM185AQ8NFB2 350 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 ZNF845Q96IR2 970 aaPredicted RBP10.56□□□□□ -0.72
TRA2B-214ENST00000487615 ADAM19Q9H013 955 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 ARRDC1-AS1Q9H2J1 176 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 D6RAR5 112 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 RER1O15258 196 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 AQP8O94778 261 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 RBP2P50120 134 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 RRADP55042 308 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 RHOUQ7L0Q8 258 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 ZNF695Q8IW36 515 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 OR52B4Q8NGK2 314 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 KISS1RQ969F8 398 aaPredicted RBP10.56□□□□□ -0.72
TRA2B-214ENST00000487615 ADIPOR1Q96A54 375 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 ZMIZ1Q9ULJ6 1067 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 ASXL3Q9C0F0 2248 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 TRAV8-7A0A075B6U6 113 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 DCTN6O00399 190 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 CCSO14618 274 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 LANCL1O43813 399 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 TK1P04183 234 aa10.56□□□□□ -0.72
TRA2B-214ENST00000487615 GSTP1P09211 210 aaKnown RBP10.56□□□□□ -0.72
TRA2B-214ENST00000487615 ZNF44P15621 663 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms