RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 OR10H3O60404 316 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 DUX4L2P0CJ85 424 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 DUX4L3P0CJ86 424 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 DUX4L4P0CJ87 422 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 DUX4L5P0CJ88 424 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 DUX4L6P0CJ89 424 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 DUX4L7P0CJ90 424 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 IRF2P14316 349 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 GPR4P46093 362 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 SLC9A3P48764 834 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 DBPQ10586 325 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-228ENST00000487354 KRR1Q13601 381 aaKnown RBP12.62□□□□□ -0.39
MCF2L-228ENST00000487354 FAM189A2Q15884 450 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 CYBRD1Q53TN4 286 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 DHRS7BQ6IAN0 325 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-228ENST00000487354 DUX4L9Q6RFH8 374 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-228ENST00000487354 PTCHD4Q6ZW05 846 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 VMO1Q7Z5L0 202 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 FAM90A1Q86YD7 464 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 GLB1L2Q8IW92 636 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 PNLDC1Q8NA58 520 aaKnown RBP12.62□□□□□ -0.39
MCF2L-228ENST00000487354 OR11L1Q8NGX0 322 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 ZNF570Q96NI8 536 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 TMBIM4Q9HC24 238 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 VSX1Q9NZR4 365 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-228ENST00000487354 ERVK-18Q9QC07 812 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 GRHPRQ9UBQ7 328 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 DUX4Q9UBX2 424 aa12.62□□□□□ -0.39
MCF2L-228ENST00000487354 A0A087WUU8 490 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 MEGF11A6BM72 1044 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 DCTN6O00399 190 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 ADAM20O43506 726 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 SLC16A7O60669 478 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 ACSM4P0C7M7 580 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 YAP1P46937 504 aaKnown RBP12.61□□□□□ -0.39
MCF2L-228ENST00000487354 DLX1P56177 255 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 FXYD6P3P58550 94 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 ELF3P78545 371 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-228ENST00000487354 PRB3Q04118 309 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-228ENST00000487354 BEND6Q5SZJ8 279 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-228ENST00000487354 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 TBPL2Q6SJ96 375 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 BTN2A1Q7KYR7 527 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 NAA40Q86UY6 237 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 SCCPDHQ8NBX0 429 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 TSPEARQ8WU66 669 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 STON2Q8WXE9 905 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 CFHR4Q92496 578 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 ZNF583Q96ND8 569 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 HDHD2Q9H0R4 259 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 DPAGT1Q9H3H5 408 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 RABEP2Q9H5N1 569 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 RNF7Q9UBF6 113 aa12.61□□□□□ -0.39
MCF2L-228ENST00000487354 ELOVL7A1L3X0 281 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 OOEPA6NGQ2 149 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 KHDRBS3O75525 346 aaKnown RBP12.6□□□□□ -0.39
MCF2L-228ENST00000487354 GYPAP02724 150 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 RPL4P36578 427 aaKnown RBP12.6□□□□□ -0.39
MCF2L-228ENST00000487354 SLC35E4Q6ICL7 350 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 CFAP77Q6ZQR2 320 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 TMPRSS11FQ6ZWK6 438 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 REC114Q7Z4M0 266 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 GCSAMQ8N6F7 178 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 LY6G5BQ8NDX9 201 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 LRTOMTQ8WZ04 291 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 TSSK2Q96PF2 358 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 GPX7Q96SL4 187 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-228ENST00000487354 NUAK2Q9H093 628 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 NMNAT1Q9HAN9 279 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-228ENST00000487354 PNRC2Q9NPJ4 139 aaKnown RBP12.6□□□□□ -0.39
MCF2L-228ENST00000487354 NRIP3Q9NQ35 241 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 FBLN5Q9UBX5 448 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 RPUSD1Q9UJJ7 312 aaKnown RBP12.6□□□□□ -0.39
MCF2L-228ENST00000487354 SIGLEC9Q9Y336 463 aa12.6□□□□□ -0.39
MCF2L-228ENST00000487354 IGLV1-36A0A0B4J1U3 117 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 RNASEK-C17orf49H0YIS7 233 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 XKRYO14609 159 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 DVL1O14640 695 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 GPR37O15354 613 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 PPP1R3DO95685 299 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 CA6P23280 308 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 SDHAP31040 664 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 EFNB2P52799 333 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 HERPUD1Q15011 391 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 ZBED5Q49AG3 693 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 CDONQ4KMG0 1287 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 LRRC23Q53EV4 343 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-228ENST00000487354 METAP1DQ6UB28 335 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-228ENST00000487354 ZNF826PQ6ZT77 177 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 MBOAT2Q6ZWT7 520 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 VTCN1Q7Z7D3 282 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 BOLLQ8N9W6 283 aaKnown RBP12.59□□□□□ -0.39
MCF2L-228ENST00000487354 OR8J3Q8NGG0 315 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 PPP1R35Q8TAP8 253 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 ACOT11Q8WXI4 607 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-228ENST00000487354 HCAR1Q9BXC0 346 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 TOR3AQ9H497 397 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 RERGLQ9H628 205 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 FN3KRPQ9HA64 309 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 KAAG1Q9UBP8 84 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms