RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.72□□□□□ -1.01
NEK4-204ENST00000487068 H2AFY2Q9P0M6 372 aaPredicted RBP8.72□□□□□ -1.01
NEK4-204ENST00000487068 PURGQ9UJV8 347 aaKnown RBP8.72□□□□□ -1.01
NEK4-204ENST00000487068 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.72□□□□□ -1.01
NEK4-204ENST00000487068 TLN2Q9Y4G6 2542 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 IGHV1-69-2A0A0G2JMI3 117 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 ZSCAN5BA6NJL1 495 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 EI24O14681 340 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 PPIHO43447 177 aaKnown RBP8.71□□□□□ -1.02
NEK4-204ENST00000487068 IGHV1-46P01743 117 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 LYNP07948 512 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 MRPL3P09001 348 aaKnown RBP8.71□□□□□ -1.02
NEK4-204ENST00000487068 H2BFMP0C1H6 154 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 SLC2A1P11166 492 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 PSKH1P11801 424 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 ACHEP22303 614 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 TUBG1P23258 451 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 SLC15A1P46059 708 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 CX3CR1P49238 355 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 MMP15P51511 669 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 GRB2P62993 217 aaKnown RBP8.71□□□□□ -1.02
NEK4-204ENST00000487068 TNFAIP6P98066 277 aaPredicted RBP8.71□□□□□ -1.02
NEK4-204ENST00000487068 PSG7Q13046 419 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 GFOD2Q3B7J2 385 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 SLC35D3Q5M8T2 416 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 LINC01590Q5TEZ4 76 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 KDM4DQ6B0I6 523 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.71□□□□□ -1.02
NEK4-204ENST00000487068 ZNF786Q8N393 782 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 TCEANCQ8N8B7 351 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 THEM6Q8WUY1 208 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 PTP4A1Q93096 173 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 PKP2Q99959 881 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 TTTY10Q9BZA0 68 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 BRD7Q9NPI1 651 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 PNRC2Q9NPJ4 139 aaKnown RBP8.71□□□□□ -1.02
NEK4-204ENST00000487068 TUBG2Q9NRH3 451 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 ZNF275Q9NSD4 429 aaPredicted RBP8.71□□□□□ -1.02
NEK4-204ENST00000487068 DDX28Q9NUL7 540 aaKnown RBP8.71□□□□□ -1.02
NEK4-204ENST00000487068 TREM2Q9NZC2 230 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 LAMP5Q9UJQ1 280 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 ZDHHC8Q9ULC8 765 aa8.71□□□□□ -1.02
NEK4-204ENST00000487068 ISPDA4D126 451 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 CLDN25C9JDP6 229 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 PRKYO43930 277 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 BAG2O95816 211 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 RAC2P15153 192 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 CHN2P52757 468 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 RAD23AP54725 363 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 LOXL1Q08397 574 aaPredicted RBP8.7□□□□□ -1.02
NEK4-204ENST00000487068 TIGD6Q17RP2 521 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 TMEM249Q2WGJ8 235 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 HFEQ30201 348 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 TMEM255AQ5JRV8 349 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 FAM209AQ5JX71 171 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 SLX4IPQ5VYV7 408 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 OR2T2Q6IF00 324 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 DRAM2Q6UX65 266 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 PGAP1Q75T13 922 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 ZNF771Q7L3S4 317 aaPredicted RBP8.7□□□□□ -1.02
NEK4-204ENST00000487068 KRT77Q7Z794 578 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 NAA40Q86UY6 237 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 OR10AD1Q8NGE0 317 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 OR10S1Q8NGN2 331 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 OR2AE1Q8NHA4 323 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 ST7LQ8TDW4 575 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 SPRYD4Q8WW59 207 aaPredicted RBP8.7□□□□□ -1.02
NEK4-204ENST00000487068 TIMD4Q96H15 378 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 DMRTB1Q96MA1 342 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 ZNF582Q96NG8 517 aaPredicted RBP8.7□□□□□ -1.02
NEK4-204ENST00000487068 IL4I1Q96RQ9 567 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 DIRC2Q96SL1 478 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 KCNJ15Q99712 375 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 ABHD6Q9BV23 337 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 C1QTNF5Q9BXJ0 243 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 TOR3AQ9H497 397 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 YAE1D1Q9NRH1 226 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 IMPAD1Q9NX62 359 aa8.7□□□□□ -1.02
NEK4-204ENST00000487068 CSPG4Q6UVK1 2322 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 HIVEP2P31629 2446 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 IGHV4-61A0A0C4DH41 118 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 LRP5LA4QPB2 252 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 GGT3PA6NGU5 568 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 ZAR1LA6NP61 321 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 VWC2LB2RUY7 222 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 H3BNX3 289 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 TLX2O43763 284 aaPredicted RBP8.69□□□□□ -1.02
NEK4-204ENST00000487068 APOC1P02654 83 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 SELEP16581 610 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 TNFRSF1AP19438 455 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 KITLGP21583 273 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 COL8A2P25067 703 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 CDC42P60953 191 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 MVKQ03426 396 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 TRIP10Q15642 601 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 SNAI3Q3KNW1 292 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 TEX30Q5JUR7 227 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 AVPI1Q5T686 147 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 FBXW12Q6X9E4 464 aa8.69□□□□□ -1.02
NEK4-204ENST00000487068 PEG10Q86TG7 708 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms