RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 UBALD1Q8TB05 177 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 RAB1CQ92928 201 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 PTX4Q96A99 478 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 RPEQ96AT9 228 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 CERS2Q96G23 380 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 BTN2A3PQ96KV6 586 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 ZNF317Q96PQ6 595 aaPredicted RBP2.81□□□□□ -1.96
SMC4-218ENST00000486711 RGCCQ9H4X1 137 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 C8orf33Q9H7E9 229 aaPredicted RBP2.81□□□□□ -1.96
SMC4-218ENST00000486711 ZDHHC4Q9NPG8 344 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 ZNF355PQ9NSJ1 428 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 PEF1Q9UBV8 284 aaKnown RBP2.81□□□□□ -1.96
SMC4-218ENST00000486711 DDX19BQ9UMR2 479 aa2.81□□□□□ -1.96
SMC4-218ENST00000486711 ADAMTS13Q76LX8 1427 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 PALLDQ8WX93 1383 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 PDZK1P1A8MUH7 402 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 GABRPO00591 440 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 NME4O00746 187 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 ZNF324O75467 553 aaPredicted RBP2.8□□□□□ -1.96
SMC4-218ENST00000486711 SLC22A5O76082 557 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 YIF1AO95070 293 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 FARS2O95363 451 aaKnown RBP2.8□□□□□ -1.96
SMC4-218ENST00000486711 MRPL3P09001 348 aaKnown RBP2.8□□□□□ -1.96
SMC4-218ENST00000486711 CISD3P0C7P0 127 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 RAB5AP20339 215 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 MSR1P21757 451 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 TALDO1P37837 337 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 PEX19P40855 299 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 NBL1P41271 181 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 BCAP31P51572 246 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 LOXL1Q08397 574 aaPredicted RBP2.8□□□□□ -1.96
SMC4-218ENST00000486711 HADHQ16836 314 aaKnown RBP2.8□□□□□ -1.96
SMC4-218ENST00000486711 CMTM8Q8IZV2 173 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 CSGALNACT2Q8N6G5 542 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 UBAC2Q8NBM4 344 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 PROKR2Q8NFJ6 384 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 OR51F2Q8NH61 342 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 ITFG1Q8TB96 612 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 FLYWCH2Q96CP2 140 aaKnown RBP2.8□□□□□ -1.96
SMC4-218ENST00000486711 CSPG4P5Q96PW8 444 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 IL22Q9GZX6 179 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 ZNF430Q9H8G1 570 aaPredicted RBP2.8□□□□□ -1.96
SMC4-218ENST00000486711 TMEM27Q9HBJ8 222 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 YTHDF2Q9Y5A9 579 aaKnown RBP2.8□□□□□ -1.96
SMC4-218ENST00000486711 PIKFYVEQ9Y2I7 2098 aa2.8□□□□□ -1.96
SMC4-218ENST00000486711 FHOD3Q2V2M9 1422 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 IGHV1OR15-9A0A0B4J2B8 117 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 SERPINE3A8MV23 424 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 DNASE2O00115 360 aaPredicted RBP2.79□□□□□ -1.96
SMC4-218ENST00000486711 RBFOX2O43251 390 aaKnown RBP eCLIP2.79□□□□□ -1.96
SMC4-218ENST00000486711 FOXH1O75593 365 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 APCSP02743 223 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 GLAP06280 429 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 ADRA2AP08913 450 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 RHOXF2BP0C7M4 288 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 TCP1P17987 556 aaKnown RBP2.79□□□□□ -1.96
SMC4-218ENST00000486711 PFN2P35080 140 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 FABP6P51161 128 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 DAOAP59103 153 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 TAS2R46P59540 309 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 RPEL1Q2QD12 228 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 LINC00483Q53H64 154 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 ULK3Q6PHR2 472 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 WDR82Q6UXN9 313 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 FAM122BQ7Z309 247 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 VTCN1Q7Z7D3 282 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 UBALD2Q8IYN6 164 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 C11orf72Q8NBR9 251 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 OR5T3Q8NGG3 340 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 OR8U1Q8NH10 309 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 OR10G6Q8NH81 332 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 PIH1D2Q8WWB5 315 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 FRZBQ92765 325 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 HAUS1Q96CS2 278 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 DYNLL2Q96FJ2 89 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 NARS2Q96I59 477 aaKnown RBP2.79□□□□□ -1.96
SMC4-218ENST00000486711 RNF145Q96MT1 663 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 SLIRPQ9GZT3 109 aaKnown RBP2.79□□□□□ -1.96
SMC4-218ENST00000486711 DEFB129Q9H1M3 183 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 DYRK4Q9NR20 520 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 CYTL1Q9NRR1 136 aa2.79□□□□□ -1.96
SMC4-218ENST00000486711 GPATCH8Q9UKJ3 1502 aaKnown RBP2.78□□□□□ -1.96
SMC4-218ENST00000486711 NACAE9PAV3 2078 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 IGHV3OR16-9A0A0B4J2B5 98 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 IGHV1-69DA0A0B4J2H0 117 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 A0A0J9YXV3 536 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 RSPH10B2B2RC85 870 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 ANKRD65E5RJM6 399 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 BPY2O14599 106 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 TRDMT1O14717 391 aaKnown RBP2.78□□□□□ -1.96
SMC4-218ENST00000486711 SIVA1O15304 175 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 CHST10O43529 356 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 MPDU1O75352 247 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 GCM2O75603 506 aaPredicted RBP2.78□□□□□ -1.96
SMC4-218ENST00000486711 TDP2O95551 362 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 ZNF688P0C7X2 276 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 RSPH10BP0C881 870 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 PGA5P0DJD9 388 aa2.78□□□□□ -1.96
SMC4-218ENST00000486711 CD37P11049 281 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms