RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 NMRAL1Q9HBL8 299 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 MAT2BQ9NZL9 334 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 PEMTQ9UBM1 199 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 HSPB7Q9UBY9 170 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ADAM29Q9UKF5 820 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 PITPNC1Q9UKF7 332 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF337Q9Y3M9 751 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 DYSFO75923 2080 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 HEATR1Q9H583 2144 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 A0A1W2PQL4 384 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 OR2M5A3KFT3 312 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 H3BN98 237 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 GOSR2O14653 212 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 NUPL2O15504 423 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 LMX1BO60663 402 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 SS18L1O75177 396 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 NDUFS7O75251 213 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 SLC43A1O75387 559 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 MED6O75586 246 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 GATBO75879 557 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 AQP8O94778 261 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 OR2F2O95006 317 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 WISP3O95389 354 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 SYNGR4O95473 234 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 KLK1P06870 262 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 UBCP0CG48 685 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 ME2P23368 584 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 HLA-DMAP28067 261 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 MAP3K8P41279 467 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 SRP9P49458 86 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 EMDP50402 254 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 NUDT6P53370 316 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 MAPK12P53778 367 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 CLDN20P56880 219 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 RPS7P62081 194 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 RPL11P62913 178 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 PAX5Q02548 391 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 TNFRSF9Q07011 255 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 RBBP4Q09028 425 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 SMN1Q16637 294 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 CTU2Q2VPK5 515 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 BSXQ3C1V8 233 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF672Q499Z4 452 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 AGAP6Q5VW22 663 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 TMEM225Q6GV28 225 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 ABLIM2Q6H8Q1 611 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 SLC48A1Q6P1K1 146 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 DEF8Q6ZN54 512 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 FUNDC1Q8IVP5 155 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 KIRREL3Q8IZU9 778 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 METTL4Q8N3J2 472 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 CCDC54Q8NEL0 328 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 OR2M3Q8NG83 312 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 OR52R1Q8NGF1 315 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 FAM46BQ96A09 425 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 ZBTB8AQ96BR9 441 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 TAMM41Q96BW9 452 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 NXNL1Q96CM4 212 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 DGCR14Q96DF8 476 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 SNX18Q96RF0 628 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 C12orf57Q99622 126 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 CPNE1Q99829 537 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 DCUN1D5Q9BTE7 237 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 TRAF4Q9BUZ4 470 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 ALG9Q9H6U8 611 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 MARCH7Q9H992 704 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 PLGRKTQ9HBL7 147 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 RANGRFQ9HD47 186 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 CISD1Q9NZ45 108 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 PTTG3PQ9NZH4 202 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 FBXL7Q9UJT9 491 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 MCTS1Q9ULC4 181 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 AUP1Q9Y679 476 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF780BQ9Y6R6 833 aa5.92□□□□□ -1.46
HDAC3-209ENST00000486618 ANK3Q12955 4377 aaKnown RBP5.92□□□□□ -1.46
HDAC3-209ENST00000486618 IGHV4-30-2A0A087WSY4 118 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 A0A0U1RRA0 63 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 A0A1B0GV72 72 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 METTL21EPA6NDL7 271 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 RFPL4AA6NLU0 287 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 RFPL4AL1F8VTS6 287 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 POC1B-GALNT4F8VUJ3 575 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 PPP6CO00743 305 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 RAB29O14966 203 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 SCO2O43819 266 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 OR10H3O60404 316 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 ESRRBO95718 433 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 GRPP07492 148 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 GSTA1P08263 222 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 OCM2P0CE71 109 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 RD3LP0DJH9 198 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 MPIP34949 423 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 TALDO1P37837 337 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 CEACAM3P40198 252 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 SLC6A9P48067 706 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 GZMKP49863 264 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 GAS1P54826 345 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 RAB10P61026 200 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF45Q02386 682 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 TAF13Q15543 124 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms