RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 EGLN1Q9GZT9 426 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 TOR3AQ9H497 397 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 RIBC2Q9H4K1 309 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 S100A14Q9HCY8 104 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 ZNF275Q9NSD4 429 aaPredicted RBP15.48■□□□□ 0.07
COL1A1-207ENST00000486572 CSPG4Q6UVK1 2322 aa15.48■□□□□ 0.07
COL1A1-207ENST00000486572 SETD2Q9BYW2 2564 aaPredicted RBP15.47■□□□□ 0.07
COL1A1-207ENST00000486572 IGHV1-69-2A0A0G2JMI3 117 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 CCDC182A6NF36 153 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 EI24O14681 340 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 TLX2O43763 284 aaPredicted RBP15.47■□□□□ 0.07
COL1A1-207ENST00000486572 CDC14BO60729 498 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 ALPLP05186 524 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 LYNP07948 512 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 CD55P08174 381 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 SELEP16581 610 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 HSD11B1P28845 292 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 POLR2IP36954 125 aaKnown RBP15.47■□□□□ 0.07
COL1A1-207ENST00000486572 CRYBB2P43320 205 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 PRKXP51817 358 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 EFNB1P98172 346 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 CDK5R2Q13319 367 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 GK2Q14410 553 aaPredicted RBP15.47■□□□□ 0.07
COL1A1-207ENST00000486572 SNAI3Q3KNW1 292 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 OR2T2Q6IF00 324 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 Q6ZR03 302 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 USP51Q70EK9 711 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 OR5AS1Q8N127 324 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 TCEANCQ8N8B7 351 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 TMEM163Q8TC26 289 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 ELMOD3Q96FG2 381 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 ZNF582Q96NG8 517 aaPredicted RBP15.47■□□□□ 0.07
COL1A1-207ENST00000486572 AMELYQ99218 206 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 TEAD3Q99594 435 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 USE1Q9NZ43 259 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 ORC6Q9Y5N6 252 aa15.47■□□□□ 0.07
COL1A1-207ENST00000486572 NF1P21359 2839 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 IQCF6A8MYZ5 107 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 CD5LO43866 347 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 APOC1P02654 83 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 TACSTD2P09758 323 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 TNFSF4P23510 183 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 OPRL1P41146 370 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 GPR6P46095 362 aaPredicted RBP15.46■□□□□ 0.07
COL1A1-207ENST00000486572 CX3CR1P49238 355 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 RIPPLY3P57055 190 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 TMEM33P57088 247 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 TNFAIP6P98066 277 aaPredicted RBP15.46■□□□□ 0.07
COL1A1-207ENST00000486572 NXNL2Q5VZ03 156 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 PGAP1Q75T13 922 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 SLC16A9Q7RTY1 509 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 MRPL21Q7Z2W9 205 aaKnown RBP15.46■□□□□ 0.07
COL1A1-207ENST00000486572 ZNF283Q8N7M2 679 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 OR8G5Q8NG78 346 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 OR2Z1Q8NG97 314 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 THEM6Q8WUY1 208 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 IL4I1Q96RQ9 567 aa15.46■□□□□ 0.07
COL1A1-207ENST00000486572 H2BFMP0C1H6 154 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 SLC2A1P11166 492 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 ALDH3A2P51648 485 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 CHN2P52757 468 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 TRIP10Q15642 601 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 HFEQ30201 348 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 AADACL4Q5VUY2 407 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 MEPCEQ7L2J0 689 aaKnown RBP15.45■□□□□ 0.06
COL1A1-207ENST00000486572 BCDIN3DQ7Z5W3 292 aaKnown RBP15.45■□□□□ 0.06
COL1A1-207ENST00000486572 PQLC1Q8N2U9 271 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 CBR4Q8N4T8 237 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 BHLHE23Q8NDY6 225 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 STMN2Q93045 179 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 YIPF3Q9GZM5 350 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 H2AFY2Q9P0M6 372 aaPredicted RBP15.45■□□□□ 0.06
COL1A1-207ENST00000486572 LAMP5Q9UJQ1 280 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 KLHDC2Q9Y2U9 406 aa15.45■□□□□ 0.06
COL1A1-207ENST00000486572 SLC22A31A6NKX4 558 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 PPIHO43447 177 aaKnown RBP15.44■□□□□ 0.06
COL1A1-207ENST00000486572 LILRA1O75019 489 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 MRPL3P09001 348 aaKnown RBP15.44■□□□□ 0.06
COL1A1-207ENST00000486572 IGHV4-31P0DP07 118 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 ANOS1P23352 680 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 GZMKP49863 264 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 RAD23AP54725 363 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 PRSS12P56730 875 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 ZNF92Q03936 586 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 GLYATL3Q5SZD4 288 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 GID4Q8IVV7 300 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 OR13G1Q8NGZ3 307 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 OR2AE1Q8NHA4 323 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 CNN2Q99439 309 aaKnown RBP15.44■□□□□ 0.06
COL1A1-207ENST00000486572 SLC30A2Q9BRI3 323 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 C9orf16Q9BUW7 83 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 OPA3Q9H6K4 179 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 SP140LQ9H930 580 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 DNAJC27Q9NZQ0 273 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 N6AMT1Q9Y5N5 214 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 CACNG2Q9Y698 323 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 HIVEP2P31629 2446 aa15.44■□□□□ 0.06
COL1A1-207ENST00000486572 LRP5LA4QPB2 252 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 C5orf63A6NC05 138 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 CLDN25C9JDP6 229 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms