RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 CHST4Q8NCG5 386 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 OR5T1Q8NG75 326 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 N4BP2L2Q92802 583 aaPredicted RBP2.13□□□□□ -2.07
LTN1-206ENST00000486427 SLC38A4Q969I6 547 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 PLIN2Q99541 437 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 CCDC77Q9BR77 488 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 ANKRA2Q9H9E1 313 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 SAMSN1Q9NSI8 373 aaKnown RBP2.13□□□□□ -2.07
LTN1-206ENST00000486427 MMACHCQ9Y4U1 282 aa2.13□□□□□ -2.07
LTN1-206ENST00000486427 SCN4AP35499 1836 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 IGHV1-3A0A0C4DH29 117 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 A0A0J9YXV3 536 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 SMCO3A2RU48 225 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 CCDC169A6NNP5 214 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 C9JVG2 144 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 SMKR1H3BMG3 65 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 AP3B1O00203 1094 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 SIRPB1O00241 398 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 NDUFAB1O14561 156 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 OTX1P32242 354 aaPredicted RBP2.12□□□□□ -2.07
LTN1-206ENST00000486427 SLC1A1P43005 524 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 RAB10P61026 200 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 RPS23P62266 143 aaKnown RBP2.12□□□□□ -2.07
LTN1-206ENST00000486427 PRKCDQ05655 676 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 PPM1LQ5SGD2 360 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 PRAMEF20Q5VT98 475 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 STUMQ69YW2 141 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 ZNF645Q8N7E2 425 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 OR4C5Q8NGB2 326 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 OR4A4PQ8NGN8 299 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 EEF1AKMT3Q96AZ1 226 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 ZNF317Q96PQ6 595 aaPredicted RBP2.12□□□□□ -2.07
LTN1-206ENST00000486427 TGS1Q96RS0 853 aaKnown RBP2.12□□□□□ -2.07
LTN1-206ENST00000486427 NMRK1Q9NWW6 199 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 HRASLS2Q9NWW9 162 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 PITPNC1Q9UKF7 332 aa2.12□□□□□ -2.07
LTN1-206ENST00000486427 COL22A1Q8NFW1 1626 aaPredicted RBP2.12□□□□□ -2.07
LTN1-206ENST00000486427 TRBV9A0A0B4J1U6 114 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 OR2AG2A6NM03 316 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 NCBP2LA6PVI3 153 aaKnown RBP2.11□□□□□ -2.07
LTN1-206ENST00000486427 K7EMT4 169 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 PLPP1O14494 284 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 EIF4E2O60573 245 aaKnown RBP2.11□□□□□ -2.07
LTN1-206ENST00000486427 EIF1BO60739 113 aaKnown RBP2.11□□□□□ -2.07
LTN1-206ENST00000486427 CLDN11O75508 207 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 PAHP00439 452 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 FTH1P02794 183 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 GLAP06280 429 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 SERPINE2P07093 398 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 PSMB5P28074 263 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 RRM2P31350 389 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 EIF1P41567 113 aaKnown RBP2.11□□□□□ -2.07
LTN1-206ENST00000486427 RBM34P42696 430 aaKnown RBP2.11□□□□□ -2.07
LTN1-206ENST00000486427 SYKP43405 635 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 SELENBP1Q13228 472 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 PGGHGQ32M88 737 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 YIF1BQ5BJH7 314 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 CARD17Q5XLA6 110 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 LRRC66Q68CR7 880 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 C22orf42Q6IC83 251 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 H3F3CQ6NXT2 135 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 NPSR1Q6W5P4 371 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 SLC16A14Q7RTX9 510 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 ADM2Q7Z4H4 148 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 CMTM1Q8IZ96 169 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 OR52E2Q8NGJ4 325 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 TMEM165Q9HC07 324 aa2.11□□□□□ -2.07
LTN1-206ENST00000486427 RRP15Q9Y3B9 282 aaKnown RBP2.11□□□□□ -2.07
LTN1-206ENST00000486427 NLRC5Q86WI3 1866 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 SMIM26A0A096LP01 95 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 SMCO2A6NFE2 343 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 LYRM9A8MSI8 78 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 CEACAM18A8MTB9 384 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 WBP4O75554 376 aaKnown RBP2.1□□□□□ -2.07
LTN1-206ENST00000486427 CNMDO75829 334 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 AQP8O94778 261 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 OR2F2O95006 317 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 IGLV6-57P01721 117 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 CT45A6P0DMU7 189 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 CT45A5P0DMU8 189 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 CT45A7P0DMV0 189 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 STXBP1P61764 594 aaKnown RBP2.1□□□□□ -2.07
LTN1-206ENST00000486427 CYP24A1Q07973 514 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 SIGLEC14Q08ET2 396 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 CT45A1Q5HYN5 189 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 METAP1DQ6UB28 335 aaPredicted RBP2.1□□□□□ -2.07
LTN1-206ENST00000486427 MRPL55Q7Z7F7 128 aaKnown RBP2.1□□□□□ -2.07
LTN1-206ENST00000486427 CSGALNACT2Q8N6G5 542 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 GPR26Q8NDV2 337 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 OR4M1Q8NGD0 313 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 CT45A3Q8NHU0 189 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 CHCHD7Q9BUK0 85 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 ANKRD60Q9BZ19 345 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 TMEM27Q9HBJ8 222 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 RHBDL2Q9NX52 303 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 MTCH1Q9NZJ7 389 aa2.1□□□□□ -2.07
LTN1-206ENST00000486427 CCDC59Q9P031 241 aaKnown RBP2.1□□□□□ -2.07
LTN1-206ENST00000486427 IGHV1-69DA0A0B4J2H0 117 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 C17orf51A8MQB3 221 aa2.09□□□□□ -2.07
LTN1-206ENST00000486427 SCAMP2O15127 329 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms