RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 PGAP1Q75T13 922 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 SPATC1Q76KD6 591 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 ERI1Q8IV48 349 aaKnown RBP10.91□□□□□ -0.66
CHMP3-208ENST00000486404 SPICQ8N5J4 248 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 ZNF283Q8N7M2 679 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 OR8G5Q8NG78 346 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 ST7LQ8TDW4 575 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 SPRYD4Q8WW59 207 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-208ENST00000486404 SLC7A6OSQ96CW6 309 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-208ENST00000486404 INTS14Q96SY0 518 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 MED20Q9H944 212 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 PNRC2Q9NPJ4 139 aaKnown RBP10.91□□□□□ -0.66
CHMP3-208ENST00000486404 CENPMQ9NSP4 180 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 DDX28Q9NUL7 540 aaKnown RBP10.91□□□□□ -0.66
CHMP3-208ENST00000486404 TMEM106BQ9NUM4 274 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 DNAJB9Q9UBS3 223 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 PCDHB10Q9UN67 800 aa10.91□□□□□ -0.66
CHMP3-208ENST00000486404 ANK3Q12955 4377 aaKnown RBP10.91□□□□□ -0.66
CHMP3-208ENST00000486404 A0A0G2JMP0 313 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 A0A0X1KG70 313 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 TCRBV3S1A0A5B6 114 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 FAM183AA6NL82 134 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 IQCF6A8MYZ5 107 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 PHF1O43189 567 aaPredicted RBP10.9□□□□□ -0.66
CHMP3-208ENST00000486404 DEAF1O75398 565 aaPredicted RBP10.9□□□□□ -0.66
CHMP3-208ENST00000486404 CLUP10909 449 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 ANXA8P13928 327 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 HSD11B1P28845 292 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 MMP16P51512 607 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 PRSS12P56730 875 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 BTG1P62324 171 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 SCGB2A2Q13296 93 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 EIF2B1Q14232 305 aaKnown RBP10.9□□□□□ -0.66
CHMP3-208ENST00000486404 KRTAP27-1Q3LI81 207 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 SPRNQ5BIV9 151 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 CXXC5Q7LFL8 322 aaKnown RBP10.9□□□□□ -0.66
CHMP3-208ENST00000486404 TMEM179BQ7Z7N9 219 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 KLHL36Q8N4N3 616 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 ZNF511Q8NB15 262 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 OR4M2Q8NGB6 313 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 OR6N2Q8NGY6 317 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 ZNRF4Q8WWF5 429 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 SLAMF6Q96DU3 332 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 CADM1Q9BY67 442 aaKnown RBP10.9□□□□□ -0.66
CHMP3-208ENST00000486404 NMNAT2Q9BZQ4 307 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 NOP16Q9Y3C1 178 aaKnown RBP10.9□□□□□ -0.66
CHMP3-208ENST00000486404 N6AMT1Q9Y5N5 214 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 NPTNQ9Y639 398 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 MXRA5Q9NR99 2828 aa10.9□□□□□ -0.66
CHMP3-208ENST00000486404 GGT3PA6NGU5 568 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 LRRC30A6NM36 301 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 PRR23D1E9PI22 279 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-208ENST00000486404 IFNL4K9M1U5 179 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 ZNF593O00488 134 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-208ENST00000486404 TIPRLO75663 272 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 ATP5HO75947 161 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 PNPP00491 289 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 HMGN1P05114 100 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 SBK2P0C263 348 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 PRR23D2P0DMB1 279 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-208ENST00000486404 PSKH1P11801 424 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 OSMP13725 252 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 GSTT1P30711 240 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 SLC15A1P46059 708 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 PRKXP51817 358 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 RPS7P62081 194 aaKnown RBP10.89□□□□□ -0.67
CHMP3-208ENST00000486404 GRB2P62993 217 aaKnown RBP10.89□□□□□ -0.67
CHMP3-208ENST00000486404 BNIP1Q12981 228 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 GK2Q14410 553 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-208ENST00000486404 GINS1Q14691 196 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 KLHL12Q53G59 568 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 ZNF362Q5T0B9 420 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-208ENST00000486404 C1orf146Q5VVC0 180 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 FAHD2BQ6P2I3 314 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-208ENST00000486404 DRAM2Q6UX65 266 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 COLCA1Q6ZS62 124 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 HS3ST5Q8IZT8 346 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 MUC20Q8N307 709 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-208ENST00000486404 TEX29Q8N6K0 151 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 OR10S1Q8NGN2 331 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 DNAJC9Q8WXX5 260 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 TMEM158Q8WZ71 300 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 SLCO4A1Q96BD0 722 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 FAHD2AQ96GK7 314 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 MEGF10Q96KG7 1140 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 DDOQ99489 341 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 MDFIQ99750 246 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 SLC30A2Q9BRI3 323 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 OR51V1Q9H2C8 321 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 PAPOLBQ9NRJ5 636 aaKnown RBP10.89□□□□□ -0.67
CHMP3-208ENST00000486404 TMEM100Q9NV29 134 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 WNK2Q9Y3S1 2297 aa10.89□□□□□ -0.67
CHMP3-208ENST00000486404 IGHV3-64DA0A0J9YX35 117 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 F5H5P2 479 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 GSC2O15499 205 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 TBX1O43435 398 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 PLPP2O43688 288 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 CIB2O75838 187 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 GLCEO94923 617 aa10.88□□□□□ -0.67
CHMP3-208ENST00000486404 IGHV2-70P01814 119 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms