RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 RFKQ969G6 155 aa10.17□□□□□ -0.78
APTX-227ENST00000485479 SPTSSAQ969W0 71 aa10.17□□□□□ -0.78
APTX-227ENST00000485479 CMBLQ96DG6 245 aa10.17□□□□□ -0.78
APTX-227ENST00000485479 DOK1Q99704 481 aa10.17□□□□□ -0.78
APTX-227ENST00000485479 YIPF3Q9GZM5 350 aa10.17□□□□□ -0.78
APTX-227ENST00000485479 ELOVL3Q9HB03 270 aa10.17□□□□□ -0.78
APTX-227ENST00000485479 C8orf4Q9NR00 106 aa10.17□□□□□ -0.78
APTX-227ENST00000485479 HAO2Q9NYQ3 351 aa10.17□□□□□ -0.78
APTX-227ENST00000485479 SVEP1Q4LDE5 3571 aa10.17□□□□□ -0.78
APTX-227ENST00000485479 OVOL3O00110 214 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 IGHV4-39P01824 125 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 GCH1P30793 250 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 SLC15A1P46059 708 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 PTH2RP49190 550 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 RPS23P62266 143 aaKnown RBP10.16□□□□□ -0.78
APTX-227ENST00000485479 ZNF92Q03936 586 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 GK2Q14410 553 aaPredicted RBP10.16□□□□□ -0.78
APTX-227ENST00000485479 TP53I3Q53FA7 332 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 GLYATL3Q5SZD4 288 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 OR2T2Q6IF00 324 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 LHFPL3Q86UP9 236 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 C8orf59Q8N0T1 100 aaPredicted RBP10.16□□□□□ -0.78
APTX-227ENST00000485479 DVL3Q92997 716 aaPredicted RBP10.16□□□□□ -0.78
APTX-227ENST00000485479 PIGTQ969N2 578 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 C1QTNF5Q9BXJ0 243 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 CXorf56Q9H5V9 222 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 TBCCD1Q9NVR7 557 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 MRM2Q9UI43 246 aaKnown RBP10.16□□□□□ -0.78
APTX-227ENST00000485479 ATPIF1Q9UII2 106 aa10.16□□□□□ -0.78
APTX-227ENST00000485479 B9A039 149 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 ZNF670-ZNF695F2Z2N8 137 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 TIMM8AO60220 97 aaPredicted RBP10.15□□□□□ -0.78
APTX-227ENST00000485479 PNPP00491 289 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 ZNF250P15622 560 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 PSMB10P40306 273 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 GRB2P62993 217 aaKnown RBP10.15□□□□□ -0.78
APTX-227ENST00000485479 ECH1Q13011 328 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 ZNF718Q3SXZ3 478 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 SPRNQ5BIV9 151 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 DMRTC1Q5HYR2 192 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 SLC25A30Q5SVS4 291 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 MEDAGQ5VYS4 303 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 ARL9Q6T311 187 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 COLCA1Q6ZS62 124 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 PRSS45Q7RTY3 260 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 SGCDQ92629 289 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 APOBEC3DQ96AK3 386 aaPredicted RBP10.15□□□□□ -0.78
APTX-227ENST00000485479 OR8B4Q96RC9 309 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 MROQ9BYG7 248 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 ACOXLQ9NUZ1 547 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 CHD3Q12873 2000 aaKnown RBP10.15□□□□□ -0.78
APTX-227ENST00000485479 CREBBPQ92793 2442 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 ZSCAN5BA6NJL1 495 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 LYNX1G3V0Z9 82 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 H0YAE9 185 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 M0R233 179 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 SSX4O60224 188 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 MPZL2O60487 215 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 ICMTO60725 284 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 LYNX1P0DP58 116 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 MAGEB1P43366 347 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 CCL8P80075 99 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 CDK5R2Q13319 367 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 EFNB3Q15768 340 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 WFDC11Q8NEX6 87 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 BPIFB6Q8NFQ5 453 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 OR52I1Q8NGK6 324 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 CNBD2Q96M20 576 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 PPP1R3EQ9H7J1 279 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 TREM2Q9NZC2 230 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 GNG8Q9UK08 70 aa10.15□□□□□ -0.78
APTX-227ENST00000485479 IGLV3-9A0A075B6K5 115 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 DAPL1A0PJW8 107 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 J3QRE1 110 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 SPRY3O43610 288 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 NCR1O76036 304 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 HLA-DPB1P04440 258 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 SELEP16581 610 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 VHLP40337 213 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 OR12D2P58182 307 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 Q5PR19 223 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 MBNL2Q5VZF2 373 aaKnown RBP10.14□□□□□ -0.79
APTX-227ENST00000485479 DRAM2Q6UX65 266 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 Q6ZR03 302 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 TGIF2LYQ8IUE0 185 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 KRTAP1-3Q8IUG1 177 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 ZNF679Q8IYX0 411 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 ZNF525Q8N782 197 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 YIPF7Q8N8F6 280 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 SETD9Q8NE22 299 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 OR10AD1Q8NGE0 317 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 OR8B12Q8NGG6 310 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 NINJ1Q92982 152 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 PGAM5Q96HS1 289 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 ISG20L2Q9H9L3 353 aaKnown RBP10.14□□□□□ -0.79
APTX-227ENST00000485479 TMEM14AQ9Y6G1 99 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 TMEM269A0A1B0GVZ9 245 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 H0YL77 283 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 OR2T7P0C7T2 308 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms