RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 KRT72Q14CN4 511 aa16.05■□□□□ 0.16
COL27A1-205ENST00000485397 PRAMEF6Q5VXH4 476 aa16.05■□□□□ 0.16
COL27A1-205ENST00000485397 C1orf87Q8N0U7 546 aa16.05■□□□□ 0.16
COL27A1-205ENST00000485397 RNF148Q8N7C7 305 aa16.05■□□□□ 0.16
COL27A1-205ENST00000485397 SLCO4A1Q96BD0 722 aa16.05■□□□□ 0.16
COL27A1-205ENST00000485397 NUDT16L1Q9BRJ7 211 aaKnown RBP16.05■□□□□ 0.16
COL27A1-205ENST00000485397 FN3KQ9H479 309 aa16.05■□□□□ 0.16
COL27A1-205ENST00000485397 RPRD1BQ9NQG5 326 aaKnown RBP16.05■□□□□ 0.16
COL27A1-205ENST00000485397 SAMD4AQ9UPU9 718 aaKnown RBP16.05■□□□□ 0.16
COL27A1-205ENST00000485397 ARPC3O15145 178 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 FSTL3O95633 263 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 LCATP04180 440 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 SLC6A6P31641 620 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 GATA4P43694 442 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 IL13RA1P78552 427 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 WDR25Q64LD2 544 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-205ENST00000485397 NLRC3Q7RTR2 1065 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 FITM2Q8N6M3 262 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 IFT27Q9BW83 186 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 CDADC1Q9BWV3 514 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 PNRC2Q9NPJ4 139 aaKnown RBP16.04■□□□□ 0.16
COL27A1-205ENST00000485397 UFSP2Q9NUQ7 469 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 ZNF446Q9NWS9 450 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 CLN8Q9UBY8 286 aa16.04■□□□□ 0.16
COL27A1-205ENST00000485397 DOCK11Q5JSL3 2073 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 OR6C68A6NDL8 312 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 FAM20BO75063 409 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 IRF2P14316 349 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 MDKP21741 143 aaPredicted RBP16.03■□□□□ 0.16
COL27A1-205ENST00000485397 OMGP23515 440 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 GGT2P36268 569 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 RAD23AP54725 363 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 SPIBQ01892 262 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 TRAP1Q12931 704 aaKnown RBP16.03■□□□□ 0.16
COL27A1-205ENST00000485397 MPPED2Q15777 294 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 DEFB112Q30KQ8 113 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 SLC36A3Q495N2 470 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 CLEC12AQ5QGZ9 265 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 BRD3OSQ6XYD6 125 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 ZNF841Q6ZN19 808 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 ZBTB46Q86UZ6 589 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 OR10S1Q8NGN2 331 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 OR2AJ1Q8NGZ0 328 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 Q8TCH9 128 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 ATF6BQ99941 703 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 ADA2Q9NZK5 511 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 CYB5R1Q9UHQ9 305 aa16.03■□□□□ 0.16
COL27A1-205ENST00000485397 TRRAPQ9Y4A5 3859 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 POM121CA8CG34 1229 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 C22orf46C9J442 243 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 HOXA3O43365 443 aaPredicted RBP16.02■□□□□ 0.16
COL27A1-205ENST00000485397 GADD45GO95257 159 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 HLA-DQA2P01906 255 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 SEMG1P04279 462 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 CD200P41217 278 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 FGF12P61328 243 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 ECH1Q13011 328 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 MALLQ13021 153 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 C16orf87Q6PH81 154 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 DCDC5Q6ZRR9 648 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 SPATC1Q76KD6 591 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 CELF2-AS1Q8N7Q2 184 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 SDR9C7Q8NEX9 313 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 OR11L1Q8NGX0 322 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 PYURFQ96I23 114 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 SPAG4Q9NPE6 437 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 MRPL22Q9NWU5 206 aaKnown RBP16.02■□□□□ 0.16
COL27A1-205ENST00000485397 TMCC3Q9ULS5 477 aa16.02■□□□□ 0.16
COL27A1-205ENST00000485397 OR10H3O60404 316 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 GMNNO75496 209 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 ANOS1P23352 680 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 NOS3P29474 1203 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 SMIM11AP58511 58 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 SLC35F1Q5T1Q4 408 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 PGAP1Q75T13 922 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 SPRYD4Q8WW59 207 aaPredicted RBP16.01■□□□□ 0.15
COL27A1-205ENST00000485397 ZDHHC16Q969W1 377 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 ERGIC1Q969X5 290 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 TMIGD2Q96BF3 282 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 CMTM5Q96DZ9 223 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 MAP6Q96JE9 813 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 MYLK2Q9H1R3 596 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 GORASP2Q9H8Y8 452 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 TNFRSF19Q9NS68 423 aa16.01■□□□□ 0.15
COL27A1-205ENST00000485397 C5orf63A6NC05 138 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 PHYHO14832 338 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 CA6P23280 308 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 PYCR1P32322 319 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 PSMB10P40306 273 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 RPS27P42677 84 aaKnown RBP16■□□□□ 0.15
COL27A1-205ENST00000485397 TPTEP56180 551 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 OR8G1Q15617 311 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 RUSC1-AS1Q66K80 236 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 SFRP4Q6FHJ7 346 aaPredicted RBP16■□□□□ 0.15
COL27A1-205ENST00000485397 TREML4Q6UXN2 200 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 MRPL21Q7Z2W9 205 aaKnown RBP16■□□□□ 0.15
COL27A1-205ENST00000485397 BOLLQ8N9W6 283 aaKnown RBP16■□□□□ 0.15
COL27A1-205ENST00000485397 PRDM13Q9H4Q3 707 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 CTSZQ9UBR2 303 aa16■□□□□ 0.15
COL27A1-205ENST00000485397 CD300LBA8K4G0 201 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms