RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 MUC3AQ02505 3323 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 TRAV27A0A087WT01 109 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 A0A1W2PPC4 97 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 NKX6-3A6NJ46 265 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 SIAH2O43255 324 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 ZNF749O43361 778 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 PPIHO43447 177 aaKnown RBP8.3□□□□□ -1.08
USP16-206ENST00000485067 CDC14BO60729 498 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 NDUFB2O95178 105 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 MT-ATP6P00846 226 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 MYL9P24844 172 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 SLC16A1P53985 500 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 RPL19P84098 196 aaKnown RBP8.3□□□□□ -1.08
USP16-206ENST00000485067 DEFA5Q01523 94 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 SLC17A1Q14916 467 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 QPRTQ15274 297 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 BSXQ3C1V8 233 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 MED25Q71SY5 747 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 GRINAQ7Z429 371 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 ABHD12BQ7Z5M8 362 aaPredicted RBP8.3□□□□□ -1.08
USP16-206ENST00000485067 OR52N4Q8NGI2 321 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 OR6K3Q8NGY3 331 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 OR51A7Q8NH64 312 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 SMPDL3BQ92485 455 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 SPSB1Q96BD6 273 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 TNFRSF13CQ96RJ3 184 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 HCAR1Q9BXC0 346 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 COMMD4Q9H0A8 199 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 PTGES2Q9H7Z7 377 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 PRTFDC1Q9NRG1 225 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 GPR173Q9NS66 373 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 RBFOX1Q9NWB1 397 aaKnown RBP8.3□□□□□ -1.08
USP16-206ENST00000485067 IL17BQ9UHF5 180 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 PPP1R3CQ9UQK1 317 aa8.3□□□□□ -1.08
USP16-206ENST00000485067 STRAPQ9Y3F4 350 aaKnown RBP8.3□□□□□ -1.08
USP16-206ENST00000485067 A0A0A6YYC8 382 aaPredicted RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 SHISA3A0PJX4 238 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 A8MWP6 167 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 B4DXG7 233 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 I3L1I5 382 aaPredicted RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 M0R143 59 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 ADAM10O14672 748 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 PLA2G10O15496 165 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 MBTPS2O43462 519 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 LILRA1O75019 489 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 REM1O75628 298 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 PPP1R3DO95685 299 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 WNT1P04628 370 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 CD1AP06126 327 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 SNRPCP09234 159 aaKnown RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 GABRA1P14867 456 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 SLC6A1P30531 599 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 MAP2K3P46734 347 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 FASLGP48023 281 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 RFX3P48380 749 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 CRYZQ08257 329 aaKnown RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 SPOCK1Q08629 439 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 CRMP1Q14194 572 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 GGTLC2Q14390 218 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 ELOCQ15369 112 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 SF3A2Q15428 464 aaKnown RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 HAGHQ16775 308 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 CHMP1BQ7LBR1 199 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 MRPL21Q7Z2W9 205 aaKnown RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 LRRC28Q86X40 367 aaPredicted RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 SYS1Q8N2H4 156 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 DUSP18Q8NEJ0 188 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 KTI12Q96EK9 354 aaPredicted RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 PTCHD1Q96NR3 888 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 TBX5Q99593 518 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 TMEM43Q9BTV4 400 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 WSB2Q9NYS7 404 aaPredicted RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 PRODH2Q9UF12 536 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 ICAM5Q9UMF0 924 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 TMEM184BQ9Y519 407 aaPredicted RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 ZC3H12DA2A288 527 aaKnown RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 B4DGG1 531 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 TEX46H3BTG2 121 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 RBMXL2O75526 392 aaKnown RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 NCR1O76036 304 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 IGKV1D-16P01601 117 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 IGHV2-5P01817 119 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 CD80P33681 288 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 INPP1P49441 399 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 DLX5P56178 289 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 KLF3P57682 345 aaPredicted RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 LSM6P62312 80 aaKnown RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 ZNF85Q03923 595 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 FUT7Q11130 342 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 FHL1Q13642 323 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP16-206ENST00000485067 ISXQ2M1V0 245 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 B3GLCTQ6Y288 498 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 LINC00696Q6ZRV3 163 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 SSX7Q7RTT5 188 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 C1orf162Q8NEQ5 155 aaPredicted RBP8.29□□□□□ -1.08
USP16-206ENST00000485067 OR5M3Q8NGP4 307 aa8.29□□□□□ -1.08
USP16-206ENST00000485067 OR2T27Q8NH04 317 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms