RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	FAM151A	Q8WW52	585 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	NRGN	Q92686	78 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	ARPC1A	Q92747	370 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	SMIM10	Q96HG1	83 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	SLC35E1	Q96K37	410 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	PKNOX2	Q96KN3	472 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	IMMP1L	Q96LU5	166 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	PRRC1	Q96M27	445 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	SLC29A1	Q99808	456 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	DEFB127	Q9H1M4	99 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	BLZF1	Q9H2G9	400 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	OR51M1	Q9H341	326 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	OR51J1	Q9H342	316 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	POMK	Q9H5K3	350 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	FGF20	Q9NP95	211 aa	Predicted RBP	2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	CCDC59	Q9P031	241 aa	Known RBP	2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	MTRF1L	Q9UGC7	380 aa	Known RBP	2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	LSM7	Q9UK45	103 aa	Known RBP	2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	TBC1D24	Q9ULP9	559 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	ING4	Q9UNL4	249 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	CHTOP	Q9Y3Y2	248 aa	Known RBP	2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	CELSR1	Q9NYQ6	3014 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	TLN2	Q9Y4G6	2542 aa		2.77	□□□□□ -1.97
VPS8-223	ENST00000485024	IBTK	Q9P2D0	1353 aa	Predicted RBP	2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	GLYATL1P3	A0A0U1RQE8	302 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	PSMB11	A5LHX3	300 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	TRIM49D1	C9J1S8	452 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	EMC8	O43402	210 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	SUPT7L	O94864	414 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	TSPAN13	O95857	204 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	IGLV1-47	P01700	117 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	GIP	P09681	153 aa	Predicted RBP	2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	CHTF8	P0CG12	524 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	TDGF1	P13385	188 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	PRKACA	P17612	351 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	KLK2	P20151	261 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	CSNK1D	P48730	415 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	TDGF1P3	P51864	188 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	CLDN18	P56856	261 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	NUP107	P57740	925 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	DEFB103A	P81534	67 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	DOC2A	Q14183	400 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	KIAA0087	Q14695	138 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	NCF4	Q15080	339 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	MRPL23	Q16540	153 aa	Known RBP	2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	RFX4	Q33E94	735 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	CCDC14	Q49A88	953 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	ZBED5	Q49AG3	693 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	HSP90AA4P	Q58FG1	418 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	VAX1	Q5SQQ9	334 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	PIP5KL1	Q5T9C9	394 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024		Q6ZSR3	168 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	CAMK2N1	Q7Z7J9	78 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	FBXL16	Q8N461	479 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	ZADH2	Q8N4Q0	377 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	ZNF502	Q8TBZ5	544 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	MARCH1	Q8TCQ1	289 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	GPX8	Q8TED1	209 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	GEMIN6	Q8WXD5	167 aa	Known RBP	2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	TMEM158	Q8WZ71	300 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	DCUN1D4	Q92564	292 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	NDRG1	Q92597	394 aa	Known RBP	2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	TMEM54	Q969K7	222 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	CLDN23	Q96B33	292 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	P2RX4	Q99571	388 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	RASL11B	Q9BPW5	248 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	ZYG11B	Q9C0D3	744 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	NANOG	Q9H9S0	305 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	NTN4	Q9HB63	628 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	PDP1	Q9P0J1	537 aa	Predicted RBP	2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	CLCF1	Q9UBD9	225 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	ICE1	Q9Y2F5	2266 aa		2.76	□□□□□ -1.97
VPS8-223	ENST00000485024	CDK5RAP2	Q96SN8	1893 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	APC2	O95996	2303 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	MROH5	Q6ZUA9	1318 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	RYR3	Q15413	4870 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	GJE1	A6NN92	205 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	ERVV-1	B6SEH8	477 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024		M0R3G1	203 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	PEX7	O00628	323 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	CCNB2	O95067	398 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	ACTL6A	O96019	429 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	CRISP2	P16562	243 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	CSNK1E	P49674	416 aa	Known RBP	2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	RORC	P51449	518 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	WNT4	P56705	351 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	CLDN8	P56748	225 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	RAD51	Q06609	339 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	SLC39A6	Q13433	755 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	AQP6	Q13520	282 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	CAVIN4	Q5BKX8	364 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	LY6G6F	Q5SQ64	297 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	THEM4	Q5T1C6	240 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	CCNJ	Q5T5M9	372 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	ABHD13	Q7L211	337 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	TMEM150A	Q86TG1	271 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	CEND1	Q8N111	149 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	OR4F15	Q8NGB8	312 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	OR10R2	Q8NGX6	335 aa		2.75	□□□□□ -1.97
VPS8-223	ENST00000485024	LYPD6B	Q8NI32	183 aa		2.75	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms