RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ST7LQ8TDW4 575 aa16.28■□□□□ 0.2
SNX17-206ENST00000484886 ELMOD3Q96FG2 381 aa16.28■□□□□ 0.2
SNX17-206ENST00000484886 ZNF582Q96NG8 517 aaPredicted RBP16.28■□□□□ 0.2
SNX17-206ENST00000484886 KCNJ15Q99712 375 aa16.28■□□□□ 0.2
SNX17-206ENST00000484886 NARFLQ9H6Q4 476 aa16.28■□□□□ 0.2
SNX17-206ENST00000484886 MARCH7Q9H992 704 aa16.28■□□□□ 0.2
SNX17-206ENST00000484886 ORC6Q9Y5N6 252 aa16.28■□□□□ 0.2
SNX17-206ENST00000484886 C2CD3Q4AC94 2353 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 INAFM1C9JVW0 142 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 H3BNX3 289 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 PRKYO43930 277 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 SLC2A1P11166 492 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 SELEP16581 610 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 EPHA2P29317 976 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 TRIP10Q15642 601 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 HFEQ30201 348 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 SLX4IPQ5VYV7 408 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 CYB5R2Q6BCY4 276 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 DRAM2Q6UX65 266 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 COLCA1Q6ZS62 124 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 MRPL21Q7Z2W9 205 aaKnown RBP16.27■□□□□ 0.2
SNX17-206ENST00000484886 TIGD4Q8IY51 512 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 THEM6Q8WUY1 208 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 RBM4BQ9BQ04 359 aaKnown RBP16.27■□□□□ 0.2
SNX17-206ENST00000484886 ABHD6Q9BV23 337 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 TREM2Q9NZC2 230 aa16.27■□□□□ 0.2
SNX17-206ENST00000484886 H2AFY2Q9P0M6 372 aaPredicted RBP16.27■□□□□ 0.2
SNX17-206ENST00000484886 TMEFF2Q9UIK5 374 aaPredicted RBP16.27■□□□□ 0.2
SNX17-206ENST00000484886 HIVEP2P31629 2446 aa16.27■□□□□ 0.19
SNX17-206ENST00000484886 ABCA1O95477 2261 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 ZAR1LA6NP61 321 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 TBX1O43435 398 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 TLX2O43763 284 aaPredicted RBP16.26■□□□□ 0.19
SNX17-206ENST00000484886 ANXA2P07355 339 aaKnown RBP16.26■□□□□ 0.19
SNX17-206ENST00000484886 IGHV4-31P0DP07 118 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 ZNF16P17020 682 aaPredicted RBP16.26■□□□□ 0.19
SNX17-206ENST00000484886 SLC2A5P22732 501 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 CRYBB2P43320 205 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 CX3CR1P49238 355 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 GZMKP49863 264 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 TMEM33P57088 247 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 CDK5R2Q13319 367 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 GK2Q14410 553 aaPredicted RBP16.26■□□□□ 0.19
SNX17-206ENST00000484886 PGAP1Q75T13 922 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.26■□□□□ 0.19
SNX17-206ENST00000484886 TCEANCQ8N8B7 351 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 ZNF454Q8N9F8 522 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 CCL17Q92583 94 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 OSBPL10Q9BXB5 764 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 DNAJC27Q9NZQ0 273 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 CACNG2Q9Y698 323 aa16.26■□□□□ 0.19
SNX17-206ENST00000484886 CLDN25C9JDP6 229 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 LILRA1O75019 489 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 RP2O75695 350 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 LYNP07948 512 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 ADH4P08319 380 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 MRPL3P09001 348 aaKnown RBP16.25■□□□□ 0.19
SNX17-206ENST00000484886 H2BFMP0C1H6 154 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 SNAI3Q3KNW1 292 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 AVPI1Q5T686 147 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 C12orf73Q69YU5 71 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 Q6ZR03 302 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 OR8G5Q8NG78 346 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 OR13G1Q8NGZ3 307 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 OR2AE1Q8NHA4 323 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 OTOSQ8NHW6 89 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 RNF133Q8WVZ7 376 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 SPRYD4Q8WW59 207 aaPredicted RBP16.25■□□□□ 0.19
SNX17-206ENST00000484886 TIMD4Q96H15 378 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 IL4I1Q96RQ9 567 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 AMELYQ99218 206 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 TOR3AQ9H497 397 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 LAMP5Q9UJQ1 280 aa16.25■□□□□ 0.19
SNX17-206ENST00000484886 A8MV72 311 aaPredicted RBP16.24■□□□□ 0.19
SNX17-206ENST00000484886 IQCF6A8MYZ5 107 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 CD55P08174 381 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 TACSTD2P09758 323 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 TNFRSF1AP19438 455 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 OTX1P32242 354 aaPredicted RBP16.24■□□□□ 0.19
SNX17-206ENST00000484886 MVKQ03426 396 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 C6orf52Q5T4I8 152 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 SLC16A9Q7RTY1 509 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 BCDIN3DQ7Z5W3 292 aaKnown RBP16.24■□□□□ 0.19
SNX17-206ENST00000484886 OR10AD1Q8NGE0 317 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 TMEM163Q8TC26 289 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 STMN2Q93045 179 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 TEAD3Q99594 435 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 GABARAPL3Q9BY60 117 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 SP140LQ9H930 580 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 S100A14Q9HCY8 104 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 BRD7Q9NPI1 651 aa16.24■□□□□ 0.19
SNX17-206ENST00000484886 NSD1Q96L73 2696 aaPredicted RBP16.24■□□□□ 0.19
SNX17-206ENST00000484886 LOC100289279A0A1B0GTE1 492 aa16.23■□□□□ 0.19
SNX17-206ENST00000484886 CCDC182A6NF36 153 aa16.23■□□□□ 0.19
SNX17-206ENST00000484886 GGT3PA6NGU5 568 aa16.23■□□□□ 0.19
SNX17-206ENST00000484886 EI24O14681 340 aa16.23■□□□□ 0.19
SNX17-206ENST00000484886 APOC1P02654 83 aa16.23■□□□□ 0.19
SNX17-206ENST00000484886 OPRL1P41146 370 aa16.23■□□□□ 0.19
SNX17-206ENST00000484886 ZNF92Q03936 586 aa16.23■□□□□ 0.19
SNX17-206ENST00000484886 SLC3A1Q07837 685 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms