RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 RSPO4Q2I0M5 234 aaPredicted RBP14.66□□□□□ -0.06
CTSA-207ENST00000484855 ZNF57Q68EA5 555 aaPredicted RBP14.66□□□□□ -0.06
CTSA-207ENST00000484855 ZNF813Q6ZN06 617 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 SLC16A14Q7RTX9 510 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 NKAIN3Q8N8D7 197 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 SNRNP27Q8WVK2 155 aaKnown RBP14.66□□□□□ -0.06
CTSA-207ENST00000484855 SLC7A6Q92536 515 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 ADAT3Q96EY9 351 aaPredicted RBP14.66□□□□□ -0.06
CTSA-207ENST00000484855 ZNF799Q96GE5 643 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 ZFP3Q96NJ6 502 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 THAP7Q9BT49 309 aaPredicted RBP14.66□□□□□ -0.06
CTSA-207ENST00000484855 RABL2AQ9UBK7 228 aaPredicted RBP14.66□□□□□ -0.06
CTSA-207ENST00000484855 RABL2BQ9UNT1 228 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 EEF1E1O43324 174 aaKnown RBP14.66□□□□□ -0.06
CTSA-207ENST00000484855 IGHG3P01860 377 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 ZNF32P17041 273 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 CCL1P22362 96 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 DOK3Q7L591 496 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 NAA40Q86UY6 237 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 OR51D1Q8NGF3 324 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 TRIM63Q969Q1 353 aa14.66□□□□□ -0.06
CTSA-207ENST00000484855 S100A16Q96FQ6 103 aaKnown RBP14.66□□□□□ -0.06
CTSA-207ENST00000484855 FAM71F1Q96KD3 344 aaPredicted RBP14.66□□□□□ -0.06
CTSA-207ENST00000484855 FRYQ5TBA9 3013 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 SLC22A20A6NK97 555 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 ZNF587BE7ETH6 402 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 SYNGR3O43761 229 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 FARS2O95363 451 aaKnown RBP14.65□□□□□ -0.06
CTSA-207ENST00000484855 DBHP09172 617 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 BDKRB2P30411 391 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 DDOSTP39656 456 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 POU3F4P49335 361 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 MMP15P51511 669 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 PCBD1P61457 104 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 RSPO1Q2MKA7 263 aaPredicted RBP14.65□□□□□ -0.06
CTSA-207ENST00000484855 FAM166AQ6J272 317 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 ZNF774Q6NX45 483 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 ZADH2Q8N4Q0 377 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 JAGN1Q8N5M9 183 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 APH1AQ96BI3 265 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 HAVCR1Q96D42 359 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 NEDD4LQ96PU5 975 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 NKX3-1Q99801 234 aaPredicted RBP14.65□□□□□ -0.06
CTSA-207ENST00000484855 SOX7Q9BT81 388 aa14.65□□□□□ -0.06
CTSA-207ENST00000484855 CGGBP1Q9UFW8 167 aaPredicted RBP14.65□□□□□ -0.06
CTSA-207ENST00000484855 E9PLN8 166 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 PATE4P0C8F1 98 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 HTR2CP28335 458 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 MAP2K3P46734 347 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 ECH1Q13011 328 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 STK11Q15831 433 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 NRN1LQ496H8 165 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 UBE2J2Q8N2K1 259 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 OR5D14Q8NGL3 314 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 OR6M1Q8NGM8 313 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 OR1F12Q8NHA8 337 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 SNIP1Q8TAD8 396 aaKnown RBP14.64□□□□□ -0.07
CTSA-207ENST00000484855 FAM3DQ96BQ1 224 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 SLC17A5Q9NRA2 495 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 UPB1Q9UBR1 384 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 TIMM10BQ9Y5J6 103 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 RPL36A-HNRNPH2H7BZ11 118 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 LANCL1O43813 399 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 TGM6O95932 706 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 SPINK2P20155 84 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 CRYGSP22914 178 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 PLA2G7Q13093 441 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 RNASE12Q5GAN4 147 aaKnown RBP14.64□□□□□ -0.07
CTSA-207ENST00000484855 GLYATL3Q5SZD4 288 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 MZT2BQ6NZ67 158 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 SKA3Q8IX90 412 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 ZNF100Q8IYN0 542 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 CELF2-AS1Q8N7Q2 184 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 OR1M1Q8NGA1 313 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 PLEKHA1Q9HB21 404 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 MED12LQ86YW9 2145 aa14.64□□□□□ -0.07
CTSA-207ENST00000484855 A0A0U1RQV5 110 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 LOC100289279A0A1B0GTE1 492 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 LOC390937A0A1W2PQ73 354 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 C5orf63A6NC05 138 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 CTDSPLO15194 276 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 LYRM1O43325 122 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 CD37P11049 281 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 FCGR2AP12318 317 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 RAB3AP20336 220 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 CDK2P24941 298 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 HTR5AP47898 357 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 TPTEP56180 551 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 ARF1P84077 181 aaKnown RBP14.63□□□□□ -0.07
CTSA-207ENST00000484855 DGCR2P98153 550 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 C2orf76Q3KRA6 126 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 TMEM69Q5SWH9 247 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 C9orf135Q5VTT2 229 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 HACD4Q5VWC8 232 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 NUFIP2Q7Z417 695 aaKnown RBP14.63□□□□□ -0.07
CTSA-207ENST00000484855 CADM3Q8N126 398 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 OR13C9Q8NGT0 318 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 AKR7LQ8NHP1 331 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 ENKURQ8TC29 256 aa14.63□□□□□ -0.07
CTSA-207ENST00000484855 FOXRED1Q96CU9 486 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms