RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 OR8B3Q8NGG8 313 aa9.58□□□□□ -0.88
SCFD1-206ENST00000484733 OR2AJ1Q8NGZ0 328 aa9.58□□□□□ -0.88
SCFD1-206ENST00000484733 OR8B2Q96RD0 313 aa9.58□□□□□ -0.88
SCFD1-206ENST00000484733 PITX2Q99697 317 aa9.58□□□□□ -0.88
SCFD1-206ENST00000484733 ATF6BQ99941 703 aa9.58□□□□□ -0.88
SCFD1-206ENST00000484733 MS4A7Q9GZW8 240 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-206ENST00000484733 SLC22A4Q9H015 551 aa9.58□□□□□ -0.88
SCFD1-206ENST00000484733 PRDM13Q9H4Q3 707 aa9.58□□□□□ -0.88
SCFD1-206ENST00000484733 ADA2Q9NZK5 511 aa9.58□□□□□ -0.88
SCFD1-206ENST00000484733 CD300AQ9UGN4 299 aa9.58□□□□□ -0.88
SCFD1-206ENST00000484733 TPTEP56180 551 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 BPIFB3P59826 476 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 TSPAN31Q12999 210 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 GK2Q14410 553 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-206ENST00000484733 SPATS1Q496A3 300 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 DCDC5Q6ZRR9 648 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 PARP8Q8N3A8 854 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 OR4K13Q8NH42 304 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 MCUR1Q96AQ8 359 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 DDOQ99489 341 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 ELAC2Q9BQ52 826 aaKnown RBP9.57□□□□□ -0.88
SCFD1-206ENST00000484733 IFT27Q9BW83 186 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 CDADC1Q9BWV3 514 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 RPRD1BQ9NQG5 326 aaKnown RBP9.57□□□□□ -0.88
SCFD1-206ENST00000484733 PCDHGB1Q9Y5G3 927 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 NBEAL1Q6ZS30 2694 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 OR6C68A6NDL8 312 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 POM121CA8CG34 1229 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 PTBP3O95758 552 aaKnown RBP9.57□□□□□ -0.88
SCFD1-206ENST00000484733 IRF2P14316 349 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 HMGA2P52926 109 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 MAB21L1Q13394 359 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 RPL13AP3Q6NVV1 102 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 ZNF620Q6ZNG0 422 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 NLRC3Q7RTR2 1065 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-206ENST00000484733 PLPP7Q8NBV4 271 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 OR11L1Q8NGX0 322 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 MRPL22Q9NWU5 206 aaKnown RBP9.57□□□□□ -0.88
SCFD1-206ENST00000484733 TMCC3Q9ULS5 477 aa9.57□□□□□ -0.88
SCFD1-206ENST00000484733 PHYHO14832 338 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 OR10H3O60404 316 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 LCATP04180 440 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 FABP3P05413 133 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 IGHV4-38-2P0DP08 117 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 PITPNBP48739 271 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 IL13RA1P78552 427 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.56□□□□□ -0.88
SCFD1-206ENST00000484733 SAMD4BQ5PRF9 694 aaKnown RBP9.56□□□□□ -0.88
SCFD1-206ENST00000484733 ZNF841Q6ZN19 808 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 LINC00346Q8IVM7 164 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 PGAM4Q8N0Y7 254 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 SLC25A28Q96A46 364 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 NUDT16L1Q9BRJ7 211 aaKnown RBP9.56□□□□□ -0.88
SCFD1-206ENST00000484733 IL1RAPQ9NPH3 570 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 TENM1Q9UKZ4 2725 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 F5H5K5 113 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 TMPRSS2O15393 492 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 GMDSO60547 372 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 NOS3P29474 1203 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 OTX1P32242 354 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-206ENST00000484733 NPY4RP50391 375 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 SLC9A3R2Q15599 337 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 CLEC12AQ5QGZ9 265 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 WDR25Q64LD2 544 aaPredicted RBP9.56□□□□□ -0.88
SCFD1-206ENST00000484733 PGBD2Q6P3X8 592 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 PGAP1Q75T13 922 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 NAA40Q86UY6 237 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 LINC00471Q8N535 108 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 FITM2Q8N6M3 262 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 RNF148Q8N7C7 305 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 BHLHE23Q8NDY6 225 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 SDR9C7Q8NEX9 313 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 SPTSSAQ969W0 71 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 SLCO4A1Q96BD0 722 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 MAP6Q96JE9 813 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 NSMCE2Q96MF7 247 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 NSRP1Q9H0G5 558 aaKnown RBP9.56□□□□□ -0.88
SCFD1-206ENST00000484733 WDR76Q9H967 626 aa9.56□□□□□ -0.88
SCFD1-206ENST00000484733 SNX3O60493 162 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 FAM20BO75063 409 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 KRT36O76013 467 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 ZNF205O95201 554 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 HLA-DPB1P04440 258 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 ZNF823P16415 610 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 RRM2P31350 389 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 PSMB10P40306 273 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 KCNJ8Q15842 424 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 SPRYD4Q8WW59 207 aaPredicted RBP9.55□□□□□ -0.88
SCFD1-206ENST00000484733 FN3KRPQ9HA64 309 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 TRIM36Q9NQ86 728 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 RNF7Q9UBF6 113 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 CLN8Q9UBY8 286 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 CDH10Q9Y6N8 788 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 CD300LBA8K4G0 201 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 M0R135 149 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 BHLHE40O14503 412 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 TNFRSF13BO14836 293 aaPredicted RBP9.55□□□□□ -0.88
SCFD1-206ENST00000484733 ARPC2O15144 300 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 WIPF1O43516 503 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms