RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-210	ENST00000484596	CMC1	Q7Z7K0	106 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	THOC6	Q86W42	341 aa	Known RBP	4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	KRT222	Q8N1A0	295 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	JAGN1	Q8N5M9	183 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	OR1N2	Q8NGR9	330 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	NEIL3	Q8TAT5	605 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	DTX3L	Q8TDB6	740 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	FAM151A	Q8WW52	585 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	DCUN1D4	Q92564	292 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	KRTAP4-3	Q9BYR4	195 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	DEFB127	Q9H1M4	99 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	MYOZ2	Q9NPC6	264 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	NRBP2	Q9NSY0	501 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	CCDC59	Q9P031	241 aa	Known RBP	4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	NYAP2	Q9P242	653 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	LGALS13	Q9UHV8	139 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	RHBDD3	Q9Y3P4	386 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	NEUROG3	Q9Y4Z2	214 aa		4.57	□□□□□ -1.68
UBR3-210	ENST00000484596	MAST2	Q6P0Q8	1798 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	GAK	O14976	1311 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	IGKV1D-13	A0A0B4J2D9	117 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	PSMB11	A5LHX3	300 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596		A8MUA0	341 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596		F6UB75	175 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596		K7ERQ8	282 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	SMC2	O95347	1197 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	ACSM4	P0C7M7	580 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	CHTF8	P0CG12	524 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	IGKV1-13	P0DP09	117 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	ZNF250	P15622	560 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	SRM	P19623	302 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	S100A5	P33763	92 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	HTR2B	P41595	481 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	BCAP31	P51572	246 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	RAD51	Q06609	339 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	COTL1	Q14019	142 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	HSP90AA4P	Q58FG1	418 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	STUM	Q69YW2	141 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	RALGPS2	Q86X27	583 aa	Predicted RBP	4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	TGIF2LY	Q8IUE0	185 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	NKAIN4	Q8IVV8	208 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	TMEM61	Q8N0U2	210 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	PRELID2	Q8N945	189 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	C8orf31	Q8N9H6	132 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	ECHDC3	Q96DC8	303 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	DUS3L	Q96G46	650 aa	Known RBP	4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	MSANTD3	Q96H12	275 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	JSRP1	Q96MG2	331 aa	Predicted RBP	4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	OR5B12	Q96R08	314 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	UCK2	Q9BZX2	261 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	TDRD3	Q9H7E2	651 aa	Known RBP	4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	RETN	Q9HD89	108 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	MYEF2	Q9P2K5	600 aa	Known RBP	4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	MTRF1L	Q9UGC7	380 aa	Known RBP	4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	TRANK1	O15050	2925 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	PARP14	Q460N5	1801 aa		4.56	□□□□□ -1.68
UBR3-210	ENST00000484596	CUL9	Q8IWT3	2517 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596		A0A0B4J2A0	478 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	NIPSNAP2	O75323	286 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	SUPT7L	O94864	414 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	CRYGC	P07315	174 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	GKN3P	P0CG01	181 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	FOLR1	P15328	257 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	MGMT	P16455	207 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	SERPINB5	P36952	375 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	RBMX	P38159	391 aa	Known RBP	4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	HAAO	P46952	286 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	AQP6	Q13520	282 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	NKAIN1	Q4KMZ8	207 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	LCN12	Q6JVE5	192 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	SPESP1	Q6UW49	350 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	RNF165	Q6ZSG1	346 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	VTCN1	Q7Z7D3	282 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	OR52E5	Q8NH55	327 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	DDI1	Q8WTU0	396 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	DCPS	Q96C86	337 aa	Known RBP	4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	PIK3IP1	Q96FE7	263 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	SH3GL3	Q99963	347 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	UQCC2	Q9BRT2	126 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	OR11A1	Q9GZK7	315 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	IL22	Q9GZX6	179 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	CCL28	Q9NRJ3	127 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	SHPK	Q9UHJ6	478 aa		4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	DDX60L	Q5H9U9	1706 aa	Known RBP	4.55	□□□□□ -1.68
UBR3-210	ENST00000484596	MROH7-TTC4	A0A0A0MT08	1334 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	LTBP2	Q14767	1821 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596		A0A1B0GVI7	797 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	RSPH10B2	B2RC85	870 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	FCN3	O75636	299 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	SERPINE2	P07093	398 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	CSF3	P09919	207 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	RSPH10B	P0C881	870 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	CCR8	P51685	355 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	FZD2	Q14332	565 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	TRAM2	Q15035	370 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	IL17A	Q16552	155 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	PGGHG	Q32M88	737 aa		4.54	□□□□□ -1.68
UBR3-210	ENST00000484596	PAGE3	Q5JUK9	113 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms