RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	EFNA4	P52798	201 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	ERVS71-1	P61550	626 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	ZNF91	Q05481	1191 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	CDK5R2	Q13319	367 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	TMED1	Q13445	227 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	TMEM255A	Q5JRV8	349 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	RFPL4B	Q6ZWI9	263 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	SSX6	Q7RTT6	188 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	SLC35F2	Q8IXU6	374 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	NUP37	Q8NFH4	326 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	OR1J2	Q8NGS2	313 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	C10orf105	Q8TEF2	133 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	RNF133	Q8WVZ7	376 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	TMEM158	Q8WZ71	300 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	RNFT2	Q96EX2	444 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	CNN2	Q99439	309 aa	Known RBP	12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	ATF6B	Q99941	703 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	OR51B6	Q9H340	312 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	POFUT1	Q9H488	388 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	CDH20	Q9HBT6	801 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	CA10	Q9NS85	328 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	CENPM	Q9NSP4	180 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	CDC42EP3	Q9UKI2	254 aa		12.79	□□□□□ -0.36
NR1H3-222	ENST00000483882	FBN1	P35555	2871 aa	Known RBP	12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	MAGEB4	O15481	346 aa	Predicted RBP	12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	CSF3	P09919	207 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	ACSM4	P0C7M7	580 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	FAM157C	P0CG43	387 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	DBT	P11182	482 aa	Known RBP	12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	ZNF16	P17020	682 aa	Predicted RBP	12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	MTNR1A	P48039	350 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	UCP2	P55851	309 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	SNTB2	Q13425	540 aa	Known RBP	12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	ADIPOQ	Q15848	244 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	MST1L	Q2TV78	715 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	CYB5R2	Q6BCY4	276 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	ZNF454	Q8N9F8	522 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	THEM6	Q8WUY1	208 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	RFK	Q969G6	155 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	LGALS12	Q96DT0	336 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	C4orf45	Q96LM5	186 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	KCNS3	Q9BQ31	491 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	BEX2	Q9BXY8	128 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	TTTY10	Q9BZA0	68 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	MRPS18A	Q9NVS2	196 aa	Known RBP	12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	CLN6	Q9NWW5	311 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	EXOG	Q9Y2C4	368 aa	Known RBP	12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	PCDHGB5	Q9Y5G0	923 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	HSPE1-MOB4	S4R3N1	261 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	COL6A5	A8TX70	2615 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	ATR	Q13535	2644 aa		12.78	□□□□□ -0.36
NR1H3-222	ENST00000483882	TMEM129	A0AVI4	362 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882		A6NHS1	94 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882		F5H5K5	113 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	PSMD9	O00233	223 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	PHF1	O43189	567 aa	Predicted RBP	12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	SMIM18	P0DKX4	95 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	USF1	P22415	310 aa	Predicted RBP	12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	SLC15A1	P46059	708 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	GALK2	Q01415	458 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	ECH1	Q13011	328 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	VHLL	Q6RSH7	139 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	COLCA1	Q6ZS62	124 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	PRSS45	Q7RTY3	260 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	C8orf59	Q8N0T1	100 aa	Predicted RBP	12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	SETD9	Q8NE22	299 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	TBX5	Q99593	518 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	KCNJ15	Q99712	375 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	ZNF442	Q9H7R0	627 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	SLCO1C1	Q9NYB5	712 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	MYRF	Q9Y2G1	1151 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	STARD10	Q9Y365	291 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882	GRIP1	Q9Y3R0	1128 aa		12.77	□□□□□ -0.37
NR1H3-222	ENST00000483882		A0A1W2PQL4	384 aa	Predicted RBP	12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	ZNF878	C9JN71	531 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	F12	P00748	615 aa	Predicted RBP	12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	IGHV4-31	P0DP07	118 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	GLRX	P35754	106 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	PDLIM4	P50479	330 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	PRKX	P51817	358 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	SNRPD2	P62316	118 aa	Known RBP	12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	ROM1	Q03395	351 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	ZNF85	Q03923	595 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	POU4F2	Q12837	409 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	CARTPT	Q16568	116 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	KCTD21	Q4G0X4	260 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	ZNF684	Q5T5D7	378 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	LRRN1	Q6UXK5	716 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	RHOU	Q7L0Q8	258 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	THAP5	Q7Z6K1	395 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	LRP11	Q86VZ4	500 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882		Q96MT0	163 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	OR8B4	Q96RC9	309 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	DCLRE1C	Q96SD1	692 aa	Known RBP	12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	ZNF649	Q9BS31	505 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	COPS4	Q9BT78	406 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	MRPS26	Q9BYN8	205 aa	Known RBP	12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	SHARPIN	Q9H0F6	387 aa		12.76	□□□□□ -0.37
NR1H3-222	ENST00000483882	TBCCD1	Q9NVR7	557 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms