RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 PRSS48Q7RTY5 328 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 KLHL36Q8N4N3 616 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 ZNF611Q8N823 705 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 YIPF7Q8N8F6 280 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 OR1J1Q8NGS3 322 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 OR52N1Q8NH53 320 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 LILRB1Q8NHL6 650 aaPredicted RBP13.23□□□□□ -0.29
CCM2-215ENST00000482714 OPA3Q9H6K4 179 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 CA10Q9NS85 328 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 FAIMQ9NVQ4 179 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 CMAHPQ9Y471 501 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 SNX5Q9Y5X3 404 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 R4GMQ9 66 aa13.23□□□□□ -0.29
CCM2-215ENST00000482714 E7EQL1 145 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 XRCC2O43543 280 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 RGS10O43665 173 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 PLAUP00749 431 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 MT-ND5P03915 603 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 ZNF250P15622 560 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 C21orf33P30042 268 aaPredicted RBP13.22□□□□□ -0.29
CCM2-215ENST00000482714 SLC6A9P48067 706 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 CX3CR1P49238 355 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 PPP1CBP62140 327 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 SNTB2Q13425 540 aaKnown RBP13.22□□□□□ -0.29
CCM2-215ENST00000482714 RGS7BPQ6MZT1 257 aaPredicted RBP13.22□□□□□ -0.29
CCM2-215ENST00000482714 NAA40Q86UY6 237 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 ZNF101Q8IZC7 436 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 ABHD4Q8TB40 342 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 TMEM171Q8WVE6 324 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 AKAP1Q92667 903 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCM2-215ENST00000482714 FBXW5Q969U6 566 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 SIGLEC11Q96RL6 698 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 STARD10Q9Y365 291 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 ROS1P08922 2347 aa13.22□□□□□ -0.29
CCM2-215ENST00000482714 CELSR2Q9HCU4 2923 aa13.21□□□□□ -0.29
CCM2-215ENST00000482714 TRIM64A6NGJ6 449 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 PRR32B1ATL7 298 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 HS3ST1O14792 307 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 NGFP01138 241 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 LCKP06239 509 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 RAC2P15153 192 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 EEF1B2P24534 225 aaKnown RBP13.21□□□□□ -0.3
CCM2-215ENST00000482714 THBS4P35443 961 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 ETV1P50549 477 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 CCR9P51686 369 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 GBX2P52951 348 aaPredicted RBP13.21□□□□□ -0.3
CCM2-215ENST00000482714 OR12D2P58182 307 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 ZNF121P58317 390 aaPredicted RBP13.21□□□□□ -0.3
CCM2-215ENST00000482714 CCDC58Q4VC31 144 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 MBNL2Q5VZF2 373 aaKnown RBP13.21□□□□□ -0.3
CCM2-215ENST00000482714 RFLNBQ8N5W9 214 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 NANOGP1Q8N7R0 232 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 KBTBD8Q8NFY9 601 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 MARS2Q96GW9 593 aaKnown RBP13.21□□□□□ -0.3
CCM2-215ENST00000482714 OR10A2Q9H208 303 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 PLEKHF2Q9H8W4 249 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 BABAM2Q9NXR7 383 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 GNG8Q9UK08 70 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 PLCE1Q9P212 2302 aa13.21□□□□□ -0.3
CCM2-215ENST00000482714 A0A0U1RQV5 110 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 B9A039 149 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 J3QLW9 94 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 PSMD9O00233 223 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 SRSF10O75494 262 aaKnown RBP13.2□□□□□ -0.3
CCM2-215ENST00000482714 ATE1O95260 518 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 ANXA2P07355 339 aaKnown RBP13.2□□□□□ -0.3
CCM2-215ENST00000482714 FAM157BP0CG42 384 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 BMP4P12644 408 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 ZNF19P17023 458 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 GCH1P30793 250 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 TTKP33981 857 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 SERPINF1P36955 418 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 LIPAP38571 399 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 DDOSTP39656 456 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 TGM4P49221 684 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 MVKQ03426 396 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 SPOCK1Q08629 439 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 EFNB3Q15768 340 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 TP53I3Q53FA7 332 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 CRYBG3Q68DQ2 2970 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 HIST2H2BCQ6DN03 193 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 FBXW12Q6X9E4 464 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 C20orf204Q6ZNR8 217 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 CCDC54Q8NEL0 328 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 SYNPRQ8TBG9 265 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 RORBQ92753 470 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 MRPL24Q96A35 216 aaKnown RBP13.2□□□□□ -0.3
CCM2-215ENST00000482714 SPSB4Q96A44 273 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 HAVCR1Q96D42 359 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 PGAM5Q96HS1 289 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 C4orf36Q96KX1 117 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 RHNO1Q9BSD3 238 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 REPIN1Q9BWE0 567 aaKnown RBP13.2□□□□□ -0.3
CCM2-215ENST00000482714 FAM206AQ9NX38 181 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 NUFIP1Q9UHK0 495 aaKnown RBP13.2□□□□□ -0.3
CCM2-215ENST00000482714 GPR160Q9UJ42 338 aa13.2□□□□□ -0.3
CCM2-215ENST00000482714 TEX15Q9BXT5 2789 aa13.19□□□□□ -0.3
CCM2-215ENST00000482714 ITPR2Q14571 2701 aa13.19□□□□□ -0.3
CCM2-215ENST00000482714 IGLV3-9A0A075B6K5 115 aa13.19□□□□□ -0.3
CCM2-215ENST00000482714 LOC110117498-PIK3R3F6TDL0 507 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms